| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0614 |
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| Symbol | |
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| ID | 4206616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 732794 |
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| End bp | 733882 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 642565174 |
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| Product | spore germination protein, putative |
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| Protein accession | YP_697941 |
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| Protein GI | 110801884 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGG GAAAGCTAAA TACAAGACAT TTTATATTTT TTATCATTGC TGCCATAAGT
ACATCTTTGG TTAACTATAC ATCCTTATTT ATAAAAATAG GCGGAAGAGA TACTTGGATT
TTCACTATAA TATCTGGAAT TATATTTTTC TTTGTAACTT CCTTTATTTT TAGTGTAATA
TCAAAGATAG AATATTACGA CTTTAAAGAA ACTTGCTATC TAGTTCTTGG TAAATCATTA
GGAAATATTT ATATATTAAT ATTTTCACTA ACTTTATTAT TAATGTGCAT AGAATCAGCT
TCTGTAAGCT CATCTTCTAT AAATGTTAAT ATTTTTGCGG AGAGTCCAAT ATGGTATTGT
TTATTGTTTT TCGTAATAAC TGTATTTTTA ATAGGTAAAA ATAGATTTAA TAGCATACTT
ATAATATGTA TAGTTTGCAT AAGTATTGTA CTTGCAATTA ATTTGTTATT AGCATTATTA
AATATTAGAT ATATAGATTA CACACTTCTT CTTCCTATAT TTAAGGATAG AAGAATTTCA
GAATATATTC TTTGTGCTTT AACTCAATTA GGCTCATTAT CAAGCTTAGC TATAGTTTTA
CCTATTCTTC CAAGAATAGA TGATAAGAAA AACTTAAAAA AGATCTCAAT AAACACAATA
CTTTTAACCT CTATATTTTG TACTTTGTGT ATTGTCATAC TAATATCAAC CCTAGGTTCT
TTGAGGTCTG CAAATGTTTT TTATCCTCAA TTTATCCAAA ACCAAAGAAT TTATTTTGGT
GGTTTTGTAG AGAATGGAAA TATTTTTGTA ATGATTTCTT CTACTCTTTC TTGGATTGTA
AAATATTTAA TAACTATTTT TTCATTGTAT ACAATTTGGA AAGATAGGGT AAAATATAAA
CGTAATTTTA TAGCATTAAT TTCAGTAATA GTATATGTCT TTTCTTACTT AGCCGCTAAG
AATGCCTATA CCCTTTTTAT ACTATTAAGA TACTATCAAT ACATACTTCT AATAGTGCTG
TTTATATGCC CTATAATCAT ATATACACTA GCCTATTTTA AGAGTCATAA ATTTAAATAT
TTGAAGTAA
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| Protein sequence | MSLGKLNTRH FIFFIIAAIS TSLVNYTSLF IKIGGRDTWI FTIISGIIFF FVTSFIFSVI
SKIEYYDFKE TCYLVLGKSL GNIYILIFSL TLLLMCIESA SVSSSSINVN IFAESPIWYC
LLFFVITVFL IGKNRFNSIL IICIVCISIV LAINLLLALL NIRYIDYTLL LPIFKDRRIS
EYILCALTQL GSLSSLAIVL PILPRIDDKK NLKKISINTI LLTSIFCTLC IVILISTLGS
LRSANVFYPQ FIQNQRIYFG GFVENGNIFV MISSTLSWIV KYLITIFSLY TIWKDRVKYK
RNFIALISVI VYVFSYLAAK NAYTLFILLR YYQYILLIVL FICPIIIYTL AYFKSHKFKY
LK
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