Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0612 |
Symbol | glnS |
ID | 4205007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 730573 |
End bp | 732231 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565172 |
Product | glutaminyl-tRNA synthetase |
Protein accession | YP_697939 |
Protein GI | 110803256 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000113459 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAATG CTGAGCACTC ATCAAACTTT ATAAGAAATA TAATAATAGA TGATTTAGAT AGCAAAAAAC ATGATACAAT AATAACTCGT TTTCCACCTG AACCTAATGG ATATTTACAT ATAGGTCATG CAAAGTCTAT AGTTTTAAAC TTTGAATTAG GAAAAGAGTT TAACGGAAGA ACTAACCTAA GATTCGATGA TACAAATCCA ATTAAAGAGG ATACTGAATA CGTTGAATCT ATTAAAGAAG ATGTTCATTG GTTAGGTTAT AACTGGAGCG AATTACATTT TGCATCAAAC TACTTTGATG AAATGTATAA AAGAGCTTTA CTTTTAATTA AAAAAGGTAA AGCTTATGTT TGTGATTTAA CTCCAGAAGA AATCAAAGAA TATAGAGGTA CTCTTACTGA GCCTGGTAAG GAAAGTCCAT ATAGAAATAG ATCAGTTGAA GAAAACTTAG ATCTATTTGA AAGAATGAGA AAAGGTGAAT TTGAGGACGG CTCAAAAGTT TTAAGAGCTA AAATAGATAT GAGCTCACCT AACATAAACT TTAGAGATCC TATAATTTAT AGAATTGCTC ATGCTAGTCA CCATAATACA GGTGATAAAT GGTGTATCTA CCCTATGTAT GACTTTGCTC ATCCATTAGA AGATGCTATT GAAGGAATAA CTCACTCTAT TTGTACTTTA GAATTTGCTG ATCACAGACC ATTATATGAT TGGTTCGTTA AAGAATGTGA AATGGAAAAT ATTCCAAGAC AAATTGAGTT TGCAAGACTT AACATTACAA ATACTGTTAT GAGTAAAAGA AAATTAAAAC AATTAGTTGA TGAAGGCATA GTTGATGGTT GGGATGATCC AAGAATGCCT ACTGTTGCCG GACTTAGAAG AAGAGGTTAC ACTCCTAAGT CAATAAGAAA CTTCTGTAAA GCTATAGGCG TTGCTAAGGC AGATTCTACT GTTGATTATC AAATGCTTGA GCATTTCATA AGAGAAGACC TTCAAGAAAC TGCTCCAAGA GCTATGGCTG TTATAAATCC ACTTAAATTA GTTATAACAA ACTATCCTGA AGGAAAATCA GAGATTCTTG AAATAGAAAA TAATCCTAAG GATGAATCAG CTGGTAAAAG AGCTGTTACA TTCTCAAGAG AAATTTATAT TGAAAGAGAG GATTTCATGG AAAATCCTCC AAAGAAATAT TTCAGATTAT TCCCAGGAAA CGAAGTAAGA TTAAAAGGTG CTTATTTTGT AAAATGTAAC GAAGTAATAA AAGATGAAAA TGGGGAAGTT ACAGAAATTC ACTGTACTTA TGACCCAGAA ACTAAGAGTG GAACTGGATT TACTGGAAGA AAAGTTAAAG GAACAATCCA CTGGGTTGAT GCTAATAACT GTATTCCTGC TGAATTTAGA TTATATGAAC CATTAATCTT AGATGATTGT GAAGAAAATG AAGGAAAGCA CTTCCTTGAG CAAATAAATC CTAACTCATT AACTATATGT AAGGGATTCA TTGAGCCAAG TGCTAAAGAT GCTAAACCTC AAGATAAATA TCAATTATTT AGACATGGAT ACTTCAATGT TGATCCTAAT TTCACAAGTG ATGATAATTT AGTATTCAAC AGAATAGTTT CATTAAAGAG TTCATTTAAA TTAAAATAA
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Protein sequence | MSNAEHSSNF IRNIIIDDLD SKKHDTIITR FPPEPNGYLH IGHAKSIVLN FELGKEFNGR TNLRFDDTNP IKEDTEYVES IKEDVHWLGY NWSELHFASN YFDEMYKRAL LLIKKGKAYV CDLTPEEIKE YRGTLTEPGK ESPYRNRSVE ENLDLFERMR KGEFEDGSKV LRAKIDMSSP NINFRDPIIY RIAHASHHNT GDKWCIYPMY DFAHPLEDAI EGITHSICTL EFADHRPLYD WFVKECEMEN IPRQIEFARL NITNTVMSKR KLKQLVDEGI VDGWDDPRMP TVAGLRRRGY TPKSIRNFCK AIGVAKADST VDYQMLEHFI REDLQETAPR AMAVINPLKL VITNYPEGKS EILEIENNPK DESAGKRAVT FSREIYIERE DFMENPPKKY FRLFPGNEVR LKGAYFVKCN EVIKDENGEV TEIHCTYDPE TKSGTGFTGR KVKGTIHWVD ANNCIPAEFR LYEPLILDDC EENEGKHFLE QINPNSLTIC KGFIEPSAKD AKPQDKYQLF RHGYFNVDPN FTSDDNLVFN RIVSLKSSFK LK
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