| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0597 |
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| Symbol | |
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| ID | 4204927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 714858 |
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| End bp | 716162 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642565157 |
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| Product | surface protein pspA precursor |
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| Protein accession | YP_697924 |
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| Protein GI | 110802887 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAA AAAAATTATT ATTAATATTA ACTACATTTT TAATGATTAA TTCTAGTCAA
ATTACTTTAG CTAAGAACTT AGATTATTCT GATGCAAAAA TGGAAATTAA AAAATCACTA
AATAATACTA ATGGATGGGT AAATAAAGAT TCTAAATGGT ATTATTTAGA TTCAAATGGT
AATATCCATA AAGGTTGGTT ATATTTAAAC GATTTATGGT ATTATCTTGA TAATATTAAT
GGTGAAATGA AAAAGGGTAT TCAAGAAATA AATGGTCATA AGTATTATTT AGATCCTTCT
AGTGGAGTTA TGAAAACTGG TTGGATAAAA ATTAATGATG ATTACTACTT CTTTGGTTCT
GATGGAGCAA TGAGAACTGG TTGGATAAAT GATGGTTGGA CAGATTATTA TTTAAAACCA
GATGGAACAA TCTTTAAAGG TTGGCTAGAT GATGGACTAA ATAAGTATTA TATGGATGAA
AATGGCCAAA TGAGAAAAGG TTGGGTCAAA TATAACGGAG ATTATTACTT CTTTGGACCT
GATGGTGCAA TGAGAACTGG TTGGATAAAT GATGGTTGGA CAGATTATTA TTTAAAACCA
GATGGAACAC CTCATATCGG TTGGTTAACT TATGATAATA ATAAATACTA CTTAAATACC
AACGGATCTA TAGCTAAACA CTGGTTATCT TTAAATAATA ATTGGTACTA CTTTGAAAAT
AATGGAGTAA TGGTTCAAAA TTCTGAAAAA ACAGTTAATG GAAACATATA TAAATTTGAT
TCAGATGGTG TAATGATAAC TGATAAATGG TTTGGCTCTA CTTATGTAAA TAAAGATGGA
ATTGTATTAC ATGGTACTCC ATCTAGATCA CATTCATATA CTCAATACAA GTTATTTAAT
TATATGAGTA ATGAAGATAA TAGAGAATCT GTTCATTATG CTGCTATAGA CCTTCACGGT
GGAGAAACAA CTAATAACTG TGTTTATTTC ACTTCTGAAG CTTTAAGAAG AGCTGGAGTT
AAAATCCCTC TATACGTGGC TAACACATAT CAATTAGAAA GAGAGTTACT TTCTAGAGGA
TGGATAAAAT CAACTAACAC AAGTGATCTT AGACCTGGAG ATGTAGTATT TTCAGGATAT
AAACATTCAT TTACATTTAT GAATTGGTAT GATAAGGATT ATGCTTATAT AGTTGATAAT
CAAAAAAAAT ATTTTGATTC TGTTCTTCAT AAAAGACTAG TCTCAGTAGA TGATCCTATT
AATGATACTA TAAGAGCAAC TCATTTCTTT TACTTACCAG AATAA
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| Protein sequence | MNKKKLLLIL TTFLMINSSQ ITLAKNLDYS DAKMEIKKSL NNTNGWVNKD SKWYYLDSNG
NIHKGWLYLN DLWYYLDNIN GEMKKGIQEI NGHKYYLDPS SGVMKTGWIK INDDYYFFGS
DGAMRTGWIN DGWTDYYLKP DGTIFKGWLD DGLNKYYMDE NGQMRKGWVK YNGDYYFFGP
DGAMRTGWIN DGWTDYYLKP DGTPHIGWLT YDNNKYYLNT NGSIAKHWLS LNNNWYYFEN
NGVMVQNSEK TVNGNIYKFD SDGVMITDKW FGSTYVNKDG IVLHGTPSRS HSYTQYKLFN
YMSNEDNRES VHYAAIDLHG GETTNNCVYF TSEALRRAGV KIPLYVANTY QLERELLSRG
WIKSTNTSDL RPGDVVFSGY KHSFTFMNWY DKDYAYIVDN QKKYFDSVLH KRLVSVDDPI
NDTIRATHFF YLPE
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