| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0590 |
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| Symbol | |
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| ID | 4205266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 703110 |
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| End bp | 704561 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 21% |
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| IMG OID | 642565150 |
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| Product | polysaccharide biosynthesis protein, putative |
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| Protein accession | YP_697917 |
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| Protein GI | 110802079 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000415804 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCAAAT CTATTTTTAA AAATATAGTA TTTAAATTTA TACTTAATTT ATTTAATTTA
GTAGTACCTA TACTAATAGG TCCTTATGTA GTAAGAAAGT TAGGACCTGA CCTTATGGGT
ACTGTAAATT TTGCTCAAAC TATATTTGGA TATTTCTTTA TATTTGCAGG ATTTGGAGTA
TATCAGTATG GATTGAGAGA AATAAGTAGA GTTAGACACA ATAAACAGTT ATTATCAAAA
ACATTTACAA GCTTATTTAT ATTTACAGGA ATGACTACTA TTATAACAAC TATAGCATAT
GTATTTTTTA TAAAATATAT GTATTCTGGG AGAATTGTAT ATACTGCTTG TATCATATTA
ACGTTTAACT TAATTGCTAA TATATTTTAT GTTGAATGGA TAAATGAAGC TTTAGAAAAT
TATGATTTTA TAACAATAAA AACAATAATT GTAAGAATAA TATATATAAT ATTACTATTT
GTTTGTGTAA AGAGTTCAAA AGATGTAAAT AATTATTTAT ATCTTTTGGT TGTGTCTACA
GTTTTGAATA ATATAATAAG TTACATTTAT ATAAAGAAAA AAATAAAATT TGATTTTAAA
GAAATAAAAA TATTAAGACA TATAAAACCT ATGTTTTTAG TTGTAATATT ATCCAACGTA
AATGTATTAT ATACACAGCT AGATAAATTT CTTTTGGGAG AGTTTGTAGG ACTTAAAGAA
GTTGGTTATT ATACCACAGC TCAAAATATA AGTACAATAA TAAGCACTTT ATTATTATCA
GTAATACATG CAACAATACC TAGATTATCA CATTATATTG CAAGTGATAA TGATGAGAAA
TATGTAAATT TATTGGATAA AATTACAAAG ATATATTTTA TGTTATTATT TCCAGCCGCT
ATTGGTATGA TTGTATTAGC TAAAGAAATA ATACTTATAT ATGGTGGACA AGAATATATA
GATGCAGTTC CAATGCTTGT AGTTTTTTCT ATATATATGA TAACTTTGGG TTATGAAACA
ATACTTGGTA ATCAAGTTAT GTATGTTAAG AAAAAAGAAA AAAAACAAGT TGAAATGATA
TTTGTTGGAG GATTTATTAA TCTAGTTTTA AATATATTTC TTTTAAAAAT AAATTTATTA
AATGGAACAT ATTCGATAAT AACAACAATG ATAGCAAATA TTATAGTTAT AATATTAGAA
TGTTTATATA TAAGAAAAAA ATTAAATTTA GACTTTAATA TTTTTTCTTT AGATAAAAAT
AAATATTTAT TTTTATCACT AATTTTTATA CCAGTTACTA ATTTAATAAA TCATTTTGCT
AATAATTTAT TTGTTATTAG TATTTTATCG ATAATAATAA ATGTTACACT ATATTTTGGA
TTCTTATTAA TTATAAAAGA TAAACCTTTT ATTGAATTAT TTAATAAGTT TATTTCAAAA
TTTAAAATAT AA
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| Protein sequence | MGKSIFKNIV FKFILNLFNL VVPILIGPYV VRKLGPDLMG TVNFAQTIFG YFFIFAGFGV
YQYGLREISR VRHNKQLLSK TFTSLFIFTG MTTIITTIAY VFFIKYMYSG RIVYTACIIL
TFNLIANIFY VEWINEALEN YDFITIKTII VRIIYIILLF VCVKSSKDVN NYLYLLVVST
VLNNIISYIY IKKKIKFDFK EIKILRHIKP MFLVVILSNV NVLYTQLDKF LLGEFVGLKE
VGYYTTAQNI STIISTLLLS VIHATIPRLS HYIASDNDEK YVNLLDKITK IYFMLLFPAA
IGMIVLAKEI ILIYGGQEYI DAVPMLVVFS IYMITLGYET ILGNQVMYVK KKEKKQVEMI
FVGGFINLVL NIFLLKINLL NGTYSIITTM IANIIVIILE CLYIRKKLNL DFNIFSLDKN
KYLFLSLIFI PVTNLINHFA NNLFVISILS IIINVTLYFG FLLIIKDKPF IELFNKFISK
FKI
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