Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0586 |
Symbol | |
ID | 4205227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 698533 |
End bp | 699630 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 642565146 |
Product | glycosyl transferase, group 1 family protein |
Protein accession | YP_697913 |
Protein GI | 110801634 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000129984 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAATG TCTTGATGAT TGATTTAGGT AGAGATTATG GTGGTGCTGA AAAAGTAATA GAGAATTTGT TTTTTTATGA TTATTCAGAT ATTAATATGC ATTTAGTAGC TTTAAAAGAT ACTAAATTTT TTAATGTAAT AAAATCTAAA AATAATAATC AAAATTATAT GTTTATTGAA AATGATAAAA AGAAAATTTT AAAGAGTCTA TTTAAAGTAA AAAAGTATAT AGAAGACAAT AAAATAGATA TAATTCATGC TCATGGAGTT ATATCTGAAA TTTTTGGAGT TTTGTTATCT AAGATGACTA AGTGTAAATT AGTTACTACT ATACATAGTA GAGCTGATTT TGATACAACT AATAAGATAA AAGGTAAATT ATATTGTTGG ATACAAAAAT ATTTATTAAA TTTTAATGAA AGATATATAG TTGTTTCGGA TGAATTAGAA AAATTCTTTA TAAATAATTT AAATGTTAAA AAGGAAAAAC TAATTTTTAT AAAAAACGGA TTAAAGGATT TAATTAAAAG AGAAAAGCAA GAACATGAGA ATGTTGTTAT TTGTAGTATA GGTAGATTAA CTGCAGTAAA AGCTCATAAT AAATTATTAA GATCACTTTT AAGTTTAAGT AATGATGGTT ATGATTTAAA GTGTTTAATA GCTGGAATAG GTGAGTTAGA AAATGAACTA AAAAAACAGG TAGAAGAATA TAATCTACAA GAAAAAGTTG AATTTTTAGG TTTCATCGAA GATGTAAGAG ATGTCTTTGA TAAATCAGAT TATTTAATAA TCCAATCAGA TATGGAAGGG CTACCAGTAA TATTATTAGA AGCAATGAGT TATAAAATGC CAATAATAGC ATATAGAGTT GGTGGTATAA AGAAGCTTTT AAAAGAAAAT CAATGTATAG AATTAAAATC TAATGAACCT GCCGATATAT CTAATGGAAT AAAGCAAGCT TTAAATAAAA ATAGGGAAGA ATTGGATTTA ATTGTTGATG AAGCTTTTCT AAATTTCAAA AAGAATTATG ATTTAAGCAT TTTTATAAAA AAGCATGAGG ATTTATACAA TGAGGTTAAA GGAGGTATTA ATGAATAG
|
Protein sequence | MLNVLMIDLG RDYGGAEKVI ENLFFYDYSD INMHLVALKD TKFFNVIKSK NNNQNYMFIE NDKKKILKSL FKVKKYIEDN KIDIIHAHGV ISEIFGVLLS KMTKCKLVTT IHSRADFDTT NKIKGKLYCW IQKYLLNFNE RYIVVSDELE KFFINNLNVK KEKLIFIKNG LKDLIKREKQ EHENVVICSI GRLTAVKAHN KLLRSLLSLS NDGYDLKCLI AGIGELENEL KKQVEEYNLQ EKVEFLGFIE DVRDVFDKSD YLIIQSDMEG LPVILLEAMS YKMPIIAYRV GGIKKLLKEN QCIELKSNEP ADISNGIKQA LNKNREELDL IVDEAFLNFK KNYDLSIFIK KHEDLYNEVK GGINE
|
| |