| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0581 |
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| Symbol | prfC |
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| ID | 4204981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 693495 |
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| End bp | 695090 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642565141 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_697908 |
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| Protein GI | 110803133 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0116263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGATT TAATTAAGGA AATAGAGAAA AGAAGAACCT TTGCCATCAT ATCTCACCCT
GATGCTGGTA AAACTACTCT TACTGAAAAA TTCTTACTTT ATGGAGGAGC TATTAGAATG
GCTGGTTCTG TAAAGGCTAG AAAAGCTGCT ACACACGCAG TTTCTGACTG GATGGAAATA
GAAAAGCAAA GAGGTATCTC TGTTACTTCA TCTGTTATGC AATTTAACTA TGGTGGATAT
TGTATAAATA TACTAGATAC TCCTGGTCAC CAAGACTTCT CAGAAGATAC ATATAGAACA
CTTATGGCTG CCGACTCAGC TGTTATGGTT ATCGATGGAG CTAAAGGGGT TGAGGATCAA
ACAAGAAAAC TATTCCAAGT TGCTTCATTA AGAGAAATTC CTATATTTAC TTTTGTAAAC
AAAATGGATA GAGAAACTAG AGATCCATTC CAACTTCTAG AAGATATTGA AAGTGAACTT
GGTATAAAAT CTTACCCAAT GAATTGGCCA ATAGGATGTG GAAGTCACTT TAAAGGTGTT
TATGATAGAG CTACAAACAC AATTCACTTA TTTGATGGTG GAAATCACGG ACAAAGCGAG
GTTTCAACTA TAACTGGTGA CTTAGAAGAT CCTAAATTTA AAGAACTTCT AGGTGAAGAT
TTACATAATA AGTTAATGGA AGATGTTGAA CTTTTAGATA TAGCTGGTGA CGAATTTGAT
TTAGAGAAAG TTAGAAAAGG AGAATTAACT CCTGTATTCT TTGGATCAGC TCTTACAAAC
TTTGGAGTTG AGCCATTTTT AAATGACTTC TTAAAACTAA CTACTTCTCC ACTTCCAAGA
AATTCATCAA TAGGTGAAAT AGATCCTATG ACTGAACCAT TTTCAGCTTT CGTATTTAAA
ATACAAGCTA ACATGAATAA AGCTCATAGA GATAGACTTG CTTTCATGAG AATATGTTCT
GGTAAATTTG AAAAAGGAAA AGATGTTTTC CACGTTCAAG GTGGTAAGAA AGTTAAACTT
GCTCAACCTC AACAATTCTT AGCTCAAGAT AGAGAGGTTG TTGAAGAAGC TTACGCTGGA
GATATCATAG GGGTATTTGA TCCAGGTATA TTCTCAATAG GAGATACTTT ATGCTTAAAT
CCTAAGAAAT TCAAATTTGA AGGTATTCCT ACATTTGCTC CTGAACACTT TGCTAGAGTT
AAACCTGTAG ATACTATGAA AAGAAAACAA TTCATAAAAG GTGTTACTCA AATAGCTCAA
GAAGGTGCTA TTCAGGTATT TAAAGAATTA CACATCGGTA TGGAAGAAAT TATAGTTGGT
GTTGTTGGTG TTCTTCAATT TGAAGTTTTA GAATATAGAT TAAAAAATGA ATACAATGTT
GATATAAAAA TGGAAAGACT TCCATTTAGA TATGTTAGAT GGATTGAAAA TGATAATATA
GATGTAGATT CACTAAACTT AACTTCTGAT ACAAAGAAAG TTAAAGATTT TAAAGATAGA
AATCTACTTA TATTCCAAAA TGACTGGGGT ATTTCATGGG CTATAGATCA CAACCCTGGA
ATAATACTTT CAGGTGTTGG TAAATCTAAC GACTAA
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| Protein sequence | MSDLIKEIEK RRTFAIISHP DAGKTTLTEK FLLYGGAIRM AGSVKARKAA THAVSDWMEI
EKQRGISVTS SVMQFNYGGY CINILDTPGH QDFSEDTYRT LMAADSAVMV IDGAKGVEDQ
TRKLFQVASL REIPIFTFVN KMDRETRDPF QLLEDIESEL GIKSYPMNWP IGCGSHFKGV
YDRATNTIHL FDGGNHGQSE VSTITGDLED PKFKELLGED LHNKLMEDVE LLDIAGDEFD
LEKVRKGELT PVFFGSALTN FGVEPFLNDF LKLTTSPLPR NSSIGEIDPM TEPFSAFVFK
IQANMNKAHR DRLAFMRICS GKFEKGKDVF HVQGGKKVKL AQPQQFLAQD REVVEEAYAG
DIIGVFDPGI FSIGDTLCLN PKKFKFEGIP TFAPEHFARV KPVDTMKRKQ FIKGVTQIAQ
EGAIQVFKEL HIGMEEIIVG VVGVLQFEVL EYRLKNEYNV DIKMERLPFR YVRWIENDNI
DVDSLNLTSD TKKVKDFKDR NLLIFQNDWG ISWAIDHNPG IILSGVGKSN D
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