| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0570 |
|---|
| Symbol | |
|---|
| ID | 4205462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 678647 |
|---|
| End bp | 680455 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642565130 |
|---|
| Product | sulfatase family protein |
|---|
| Protein accession | YP_697897 |
|---|
| Protein GI | 110803087 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA AAGTAAAAAG TTTTTTTAAG TGTAACTGGG TTTTTATTTT CTTAGTGATA
ACACTTCAAA TAAAATCAAT GTTACTTTTA TCTATGCTTA GAACTCCGGG GTCTAGAGGA
ATTAATTTTG ACTTAATGTA TTTTACTCCC CCTGCTTGGT GGGCTCATAT AGCAATAGTT
ACGTTAATAG CGAGTTTTGT TTATCTATTT AAAGGTAAAG GAAGAATATG GGCCGGTATA
GTTATTGATA TTCTAGTAAC AATTTTATTT GTGGCTGATA TTTGGTATTA CAGAGTAAAT
GGAACTTTTT TATCAATAAG ACATATAATT GAGCCAGGAA TATTTAATCC TGTAGGAAAG
AGCTTATTTA ATTTAGCTAA AGTAGATGTA GTGTTCATAG TTGATTTTAT AATATTATTT
TTAGTTTATA ACTTTACAGG CTTAAAAAAT GTTAAATATA AAAATAATAT AAAAACTAGA
TTAATTGCAT TTATATGCCT TTTTGGAATA AGTGCAACAG TAATAGGGGT ATCACACTAC
TATATAGATA TTGAAAAAAA ATCAGATAAA AGTTTTTTAA GAATATCATG GGCGCCTTTT
CAAACAATTA GTGATTCAAG TCCATTAGGA TATCATGGAT ATGATATTTA TTATTATGCT
AACAGAAAAG AAACTTTAAC TGATGCTCAA AAAAATGAAA TTAAAACTTG GTTTGATGAA
AACAAAGAAG ATTTACCAGA TAACAAGTAT AAAGGTATGC TTCAAGGAAA AAATGTTATA
GCCTTGCAGG TTGAGTCTCT TGAAAACTTT GTTATAGGTA AAAAAGTTTA TGGTCAAGAG
ATTACTCCAA ACATAAATAA ACTTTTAAAG AATAGTTTAT ATTTTGATAA TATAAAAGAA
CAAAACAATT CAGGAACAAG TTCAGATTGC GATATAATGG TTAATACATC AATACTTCCT
GTTAGAGAAG GAACTACAGT ATTTGGTTAT CCATGGGCTG AATATAATAC TTTACAGAAA
ATATTAAAGA GTAAGGGATA TTCAACAGTT TCAACACATC CAGAGGTTCC TGGAAATTGG
AACTGGGCAG AGGTTCATAA GGCATTTAAA GCTGATGAAA TATGGGATGC TCATCAGTTT
GATCAAAGTG AAATCATAGG ACTTGGAATG TCAGATGAAT CTTATTTAAG ACAGGTTGGA
GAAAGATTAA AGAGTCAAAA ACAACCTTTC TATACATTCT TAGTAACATT AACAAGTCAT
GGACCATTTG ATATGCCTAA GGATAAACAA TATTTAAATT TACCAGAAGA TTTAAATGAA
AATATGTTAG GTGCATATTT CCAAAGTGTT AGATATACAG ATGAAGCTAT TGGAGAATTT
ATAAATCAAT TGAAAGAAGA AGGTCTTTTA GACAATACTG TAATAATGAT TTATGGAGAT
CATGGTGGAG TTCATAAATT CTATGAAGAT AAAATAAAAG ATGCTCCTTT AGAGGGAGAT
TGGTGGAAAG ATGATGAAAA GGAAATACCT TTCTTAATAT ACAATCCAAG TATTAATGGA
GAGACTATAT CAAAAGAAGG TGGTCAAATA GATTTCTTAC CAACTATAGC ATACCTTTTA
GGATTTAATA GAGATACTTT TGATAATACA GCAATGGGAA GAGTATTAGT AAATACTAAT
AGAAATGCAA GCATATTAAA TAATGGAGAA ATAGTTGGAA ATCCAACACC TGAAGAAAAA
GCTCATTTAG AGAAATCATT TAATATTGCA GATATGATTA TACAAGGAAA TTATTTTAAA
AATAATTAA
|
|---|
| Protein sequence | MKEKVKSFFK CNWVFIFLVI TLQIKSMLLL SMLRTPGSRG INFDLMYFTP PAWWAHIAIV
TLIASFVYLF KGKGRIWAGI VIDILVTILF VADIWYYRVN GTFLSIRHII EPGIFNPVGK
SLFNLAKVDV VFIVDFIILF LVYNFTGLKN VKYKNNIKTR LIAFICLFGI SATVIGVSHY
YIDIEKKSDK SFLRISWAPF QTISDSSPLG YHGYDIYYYA NRKETLTDAQ KNEIKTWFDE
NKEDLPDNKY KGMLQGKNVI ALQVESLENF VIGKKVYGQE ITPNINKLLK NSLYFDNIKE
QNNSGTSSDC DIMVNTSILP VREGTTVFGY PWAEYNTLQK ILKSKGYSTV STHPEVPGNW
NWAEVHKAFK ADEIWDAHQF DQSEIIGLGM SDESYLRQVG ERLKSQKQPF YTFLVTLTSH
GPFDMPKDKQ YLNLPEDLNE NMLGAYFQSV RYTDEAIGEF INQLKEEGLL DNTVIMIYGD
HGGVHKFYED KIKDAPLEGD WWKDDEKEIP FLIYNPSING ETISKEGGQI DFLPTIAYLL
GFNRDTFDNT AMGRVLVNTN RNASILNNGE IVGNPTPEEK AHLEKSFNIA DMIIQGNYFK
NN
|
|---|
| |