| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0562 |
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| Symbol | lysA |
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| ID | 4204774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 668735 |
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| End bp | 670030 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565122 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_697889 |
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| Protein GI | 110802485 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAT TTGGATCAAT GAAAGTAGAA GGAAATGAGT TATATGTTGG AGGAGTAAAA
GCAAGTGATT TAAGCAAGGA ATATGGAACT CCTTTATATG TTATTGATGA AGAGTTAGTG
AGAGGCAATT GTAGAAGATA CTATAATGCT ATGAAGTGTG AAGAAAGAGG AAACAGAGTT
ACCTATGCAG GAAAGGCATT TATAAATATG TCCATGTGCA ATTTAGTTAA TGAAGAAAAT
TTATATTTAG ATGTTGTTTC AGGTGGAGAG CTTTATACTG CTTATAAAGC AGGTTTCCCA
TTAGAAAGAA TATATTTCCA TGGTAACAAT AAATCTGATT ATGAAATAGA TTTAGGAGTA
AGGTTAGGAA TTGGAAGATT TATAGTTGAT AATATTCATG AACTAGAAGT TCTTAATTCT
ATAGCTCAAG AATATGGAAG AGTTCAAAAA GTTTATTTGA GAATAACTCC TGGAGTAGAG
GCCCATACCC ATGAATATAT AAAAACAGGT CAATTGGACT CAAAATTTGG ATTCCCTGTA
ATTGGTGATA CAGTTTATGA CGCTATTAAA AGAGCAATGG AATTAGAGTA TATAGAACTT
AATGGATTGC ATTGTCATAT AGGTTCTCAA ATATTTGACT TAGAACCTTT TGAAGATACA
ACAGAAATTA TGCTAAATCT TATAAATGAT ATAAAAGAAA CCTTAGGATA TGAAATAAAA
GAATTAGACT TAGGTGGAGG ATTTGGTATA TATTATACTG AAGGGGATAA GCCAAAAGAA
ATAGAAGAAT ATTGTTCAGT TATAATAAAT AAAGCTGATG AAATATGCAG AAAGTTAAAT
ATGAATGTTC CTATATTAAG TATAGAGCCA GGAAGAAGTA TTGTGGGGAA TGCAGGATTA
ACTCTTTATA CTGTAGGAGC TATAAAAGAA ATTCCTAATA TAAGAAAATA TGTAAGTGTA
GATGGGGGAA TGAGTGATAA TATAAGACCA GCCTTATACA GTGCAAATTA TGAGTCAATA
ATAGCTAACA GAGTTTTTGA TAATTCTAAG GAGATAGTTA CTGTGGCTGG AAAATGCTGT
GAATCAGGGG ATGTGCTTTT AAATTCTATA GAAATGCCTA GAATGGAAAC AGGAGATATA
TTAGCTATAA TATCTACAGG GGCATATGGA CATTCAATGG CTAATAATTA TAATAGAATT
CCTAAGGCGG CAGTTGTGAG TGTAAGTAAT GGAATTTCAA AAGTTATGTG TAAAAGAGAG
ACTTATGAAG ATTTGCTTAG AAACGAGTGT TTTTAA
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| Protein sequence | MKLFGSMKVE GNELYVGGVK ASDLSKEYGT PLYVIDEELV RGNCRRYYNA MKCEERGNRV
TYAGKAFINM SMCNLVNEEN LYLDVVSGGE LYTAYKAGFP LERIYFHGNN KSDYEIDLGV
RLGIGRFIVD NIHELEVLNS IAQEYGRVQK VYLRITPGVE AHTHEYIKTG QLDSKFGFPV
IGDTVYDAIK RAMELEYIEL NGLHCHIGSQ IFDLEPFEDT TEIMLNLIND IKETLGYEIK
ELDLGGGFGI YYTEGDKPKE IEEYCSVIIN KADEICRKLN MNVPILSIEP GRSIVGNAGL
TLYTVGAIKE IPNIRKYVSV DGGMSDNIRP ALYSANYESI IANRVFDNSK EIVTVAGKCC
ESGDVLLNSI EMPRMETGDI LAIISTGAYG HSMANNYNRI PKAAVVSVSN GISKVMCKRE
TYEDLLRNEC F
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