Gene CPR_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0555 
Symbol 
ID4205252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp656116 
End bp656736 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content26% 
IMG OID642565112 
Productisochorismatase family protein 
Protein accessionYP_697883 
Protein GI110802065 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGTG GAATTTATGA AAGGATTCAA TCCTTAGAAA GTTTAGATTT AAAAAGTTTA 
GATAAGAATA GAACAATACT TTTAATAGTT GATATAAATA AAGGATTTGC TAAAGCAGGA 
GCTTTATATA GTGATAGAAT AGAGAAATTA ATAAATCCAA TAAGTAATTT AGCAAAGTAT 
GCTTTAAATA ATGGAATAAA AGTTAAAGCC TTTACTGATT ATCATACAGA AGACTCAATA 
GAATTAAAAG CATATCCTAA GCATTGTATG AAGGATACAG ATGAATGGGA ACTTGTTGAG 
GAATTGAACT TAGAGGGAAT AGAAGTTATA AAGAAAAATT CAACAAATGG ATTTTTAGAG 
GAGAATTTCA TATTAAATAA AGAAGAGATA GACAATGTAA TAATAGTAGG AGATTGTACA 
GATATATGCA TTTATCAATT AGCTATAAGC TTAAGAGCAG AATTTAATAG AGTTAATAAA 
GATGGGGAAA TATATGTACC CAAAAAACTT GTAGATACAT TTGATATGCC TATGCATAAA 
GCTAATTTTA TGAATTATGT ATTTTTAAAC TCTATGATTG ATAATGGTGT GAATGTTATT 
GAAGATATTA TTTTAGATTA A
 
Protein sequence
MISGIYERIQ SLESLDLKSL DKNRTILLIV DINKGFAKAG ALYSDRIEKL INPISNLAKY 
ALNNGIKVKA FTDYHTEDSI ELKAYPKHCM KDTDEWELVE ELNLEGIEVI KKNSTNGFLE 
ENFILNKEEI DNVIIVGDCT DICIYQLAIS LRAEFNRVNK DGEIYVPKKL VDTFDMPMHK 
ANFMNYVFLN SMIDNGVNVI EDIILD