Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0550 |
Symbol | |
ID | 4204088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 650364 |
End bp | 652256 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642565107 |
Product | fructose specific permease |
Protein accession | YP_697878 |
Protein GI | 110801496 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR00848] PTS system, fructose subfamily, IIA component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTT CTCAATTATT AAGTCTTGAC ACAATAAAAC TAGACCTTGC TGCATCTAAT AAAAATGAAG TTATAGACCA ATTAGTTGAT GTTTTGTGGG ATGCCGGAAA GTTAACTGAT AAAAATCTTT ATAAAGAAGA AATTTTAAAA AGAGAAAGCT TATCTTCCAC TGGTATTGGC GAAAGAATAG CAATTCCTCA CGCTAAAACA AAGGCAGTAA AAAATGCATC TTTAGCTCTT GGTCTTTATA AAGATGGAGT AGATTATGAT TCACTTGATG GTGAACCTGT TAATATAGTA TTTATGATTG CTGCTCCAGA TGGAGCAAAT GATGAGCATT TAGAAACTCT ATCTAGACTT TCCGTACTTT TAATGAATCC TGATTTCAAA AATGGACTTT TAAATGCTAA AACACCAGAA GAAGTTATTT CTCTTCTTGA TAAATTTGAA GAAAATGAAG AATCTGATGA AATTAATAAT TCTAACGAAA TAGAAAATAA TTCAAATAAA AAATATATCT TAGCTGTCAC AGCATGTCCA ACTGGTATTG CTCATACTTA CATGGCTGCT GATTCACTTA ACAAAACTGC TAAGGAAATG GATATAAATA TAAAAGTTGA AACTAATGGT TCAACAGGTG TAAAAAATAG ATTAACTCAA GAAGACATAG ATAATGCTGA TGGTATAATA GTTGCAGCCG ATAAACAAGT TGAAATGGCT AGATTTAATG GTAAAAAGGT TGTAATAGTT CCTGTAGTTC AAGCTATGAA AAGACCTAAA GAATTAATAA ACGAAGCATT AAGTGGCTCT GCTCCAGTTT ATTCTCATTC TGGAGATTCC TCTAATCAAT CTTCTGGCAA GACTGAAAGA AGAGGATTTT ATAAACACTT AATGAATGGT GTTTCAAATA TGTTACCATT TGTTGTTGGT GGGGGTATAT TAATAGCTAT ATCATTTATG TTTGGTATTC ACTCAGCTGA AATAAATGAT CCTACTTTTA GTCCAATAGC CAAATTATTA AAAGATATTG GTGGAGGAAA TGCTTTCTTC CTTATGATTC CTGTTCTTGC TGGATTCATT GGATCAAGTA TAGCTGATAG ACCTGGATTT GCACCTGCTA TGGTTGGTGG TTTAATCGCT GCTAACAGTG GTTCTGGCTT CCTTGGTGGA TTAATAGCTG GTTTCCTTGG TGGATATGTA GTTGTATTAT TAAAGAAAAT ATTTAGTAAA TTACCTCAAT CACTAGAAGG TATTAAACCT GTTTTACTGT ATCCTCTATT TGGTATCTTA ATAACTGGTG CCTTAATGTA CTTAGTAATT GTGGGTCCTG TAACTGCTTT AAATAATAAC ATAGCAATAT GGTTACAAAA CATGGGAACT GGAAACTTAG TTCTTCTTGG AATAGTATTA GGTGGAATGA TGGCTATAGA TATGGGAGGT CCTATAAATA AGGCTGCATT TACCTTTGGT ATAGCTATGA TAGCTTCTGG AAACTACTAT CCACATGCTG CTATAATGGC TGGTGGTATG GTACCTCCTT TAGCTACAGC TTTAGCAACT ACTTTCTTCA AAAATAAATT TACTAAAGAT GAAAGAGATG CTGGTACTAC TAACTATATA ATGGGATTAA CTTTCATAAC TGAAGGAGCT ATTCCATTTG CTGCCGCTGA CCCATTCAGA GTTATACCTG CTTGTGTTAT AGGTTCAGCT CTAGCTGGAG GATTATCAAT GGTATTTAAA ATAGGTTTAC CTGCTCCTCA TGGTGGAATA TTCGTAATTC CAGTAGTTGA AGGAAATCCT CTTTTATATC TTCTATCAAT ATTAATAGGC TCTATTGTAG CTGCTCTAAT AATAGGATTC TTAAAAAAAC CTGTAAATGA AATAAATAAA TAA
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Protein sequence | MKISQLLSLD TIKLDLAASN KNEVIDQLVD VLWDAGKLTD KNLYKEEILK RESLSSTGIG ERIAIPHAKT KAVKNASLAL GLYKDGVDYD SLDGEPVNIV FMIAAPDGAN DEHLETLSRL SVLLMNPDFK NGLLNAKTPE EVISLLDKFE ENEESDEINN SNEIENNSNK KYILAVTACP TGIAHTYMAA DSLNKTAKEM DINIKVETNG STGVKNRLTQ EDIDNADGII VAADKQVEMA RFNGKKVVIV PVVQAMKRPK ELINEALSGS APVYSHSGDS SNQSSGKTER RGFYKHLMNG VSNMLPFVVG GGILIAISFM FGIHSAEIND PTFSPIAKLL KDIGGGNAFF LMIPVLAGFI GSSIADRPGF APAMVGGLIA ANSGSGFLGG LIAGFLGGYV VVLLKKIFSK LPQSLEGIKP VLLYPLFGIL ITGALMYLVI VGPVTALNNN IAIWLQNMGT GNLVLLGIVL GGMMAIDMGG PINKAAFTFG IAMIASGNYY PHAAIMAGGM VPPLATALAT TFFKNKFTKD ERDAGTTNYI MGLTFITEGA IPFAAADPFR VIPACVIGSA LAGGLSMVFK IGLPAPHGGI FVIPVVEGNP LLYLLSILIG SIVAALIIGF LKKPVNEINK
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