Gene CPR_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0546 
Symbol 
ID4204387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp646419 
End bp646982 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content30% 
IMG OID642565103 
ProductISCpe2, transposase orfA 
Protein accessionYP_697874 
Protein GI110801771 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTGG CAAGAACACC CGTGATTTCA ATCATGGGTG TTCTTGCCGC GACATATGCT 
AAAAGTATAA ACCGTCTAAC ACTTGCAAAT AAGTTATATT TTAGTTTTAA ATATTTTACA 
TATGTTAAAT TAAATAATAA TATAATTAAA GAGGTGGTAA TAATGGCTCA AGTCAAGCAA 
GGCAGAGGTT ATGTGTATTG TATTCAATAT CATATAGTAT GGTGTGTTAA ATACAGAAGA 
AAAGTATTGT TTGGTGATGT GGATAAATCT CTTAAAGAAA TAATATTAAA AATAGCAAAT 
GATAATAATT TTGAAATTTC TGAAATGGAA ACTGATAAAG ACCATATACA CCTGTTAATA 
GAATGTTCTC CACAACATCA AATTCCAAAT ATAATTAAAG CGTTAAAGGG AGTATCTGCA 
AGGTTACTGT TCTTGAAACA TCCTGAAATT AAAAGATATC TATGGGAAGG AAACCTATGG 
AATCCAAGCT ATTTTGTAGC TACTGTATCA GAGAATACAG AAGAACAAAT TAGAAACTAT 
ATTCAAAATC AACAAGTAAA GTGA
 
Protein sequence
MPLARTPVIS IMGVLAATYA KSINRLTLAN KLYFSFKYFT YVKLNNNIIK EVVIMAQVKQ 
GRGYVYCIQY HIVWCVKYRR KVLFGDVDKS LKEIILKIAN DNNFEISEME TDKDHIHLLI 
ECSPQHQIPN IIKALKGVSA RLLFLKHPEI KRYLWEGNLW NPSYFVATVS ENTEEQIRNY 
IQNQQVK