| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0540 |
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| Symbol | |
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| ID | 4204494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 640231 |
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| End bp | 641616 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642565097 |
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| Product | ABC transporter, substrate-binding protein |
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| Protein accession | YP_697868 |
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| Protein GI | 110803174 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA AATTAGTTAA AATGCTAACT GTTGCATGTG TTACAGCTAT AGCTGCCTCT
GCATTTGTTG GATGTGGAAA TAAAGAAGAG ACACCAAAAG ATAATGAAAA ACCATCAACT
GAACAAGCTG AAGGTTCAGG AGAGAAAAAG GTTTTAGAAA TAGCTGTTTT TGAAGGTGGA
TTTGGTAAGG ATTACTGGGA AGCTTGCATA GAGGCTTTTG AAGCTGAACA TCCTGATGTA
GAAGTTAAGA TGGAAGCTAA TCCTAAAATA GGTGATATTA TAAGGCCTAA ATTATCATCA
GAAAAAACAC CTGATTTTAT ATATTTAAGT ACAAATGATC CATCAGGTAT AGCTAATGCT
TTAATAAAGG ATAAAGCTTT AGTAGATTTA AGTGATGTAT TCGATAGAGA AGATCCAGAT
AATCCAGGAC AAAAATTAAA AGATAAAATA TTACCAGGAT TTTTAGATAC ACCACTTACA
ACTCCATATG GAGATGGAAA AGTATTTTTA GCACCACTTT ACTATAATGT TACAGGTATG
TGGTATAACA AAGCATTATT CAAAGAAAAA GGATGGGAAG TTCCAAAAAC TTGGGATGAG
TTCTTTGAAT TAGGTAAGAA GGCAAAAGAT GAGGGAATAG CTCTTTATAC TTATCAAGGA
CAAGCGCCAG GATACAATGA GGCTGTAATA TTCCCAATGT TAGCTAGTGC AGCTGGAGAA
GAAACTGTAG AAAAGATATT CAACTATGAA GAAGGTGCAT GGAAAGATCC AAATGTTAAA
AAAGCATTAG ATATATTCCA AAGGATGGCT GACGAGGACA TGGTTCTTAA TGGAACTGTT
GGTATGACTC ATACTCAAGC ACAAGTTGAA TTCTTAAATG GAAAAGCATT ATTCTTACCA
TGTGGTAGCT GGTTAGAAGG AGAAATGAAA GATGCTATAC CAGAAGGATT TGAGTTTGGA
TTTATGGCTC CACCAGCATT TAAAGAAGAG GATACTCCAT ATGTAACTAC TACAATAGAG
CAAATGTATA TCCCAGCTAA ATCAGATCAA GTTGAATTAG CAAAAGAATT CTTAGCATTC
CAATATACAG ATGCTATGGT TAAAAAGAAT GCTGAAATAG CTAAGGCTGT AGTTCCAGTT
AAGGGAGCAG TTGAAAAAGC TAAATCTTCA TTAGATGCAT CAGGATATGA GTCTTATAAG
GTTGTTGAAG AAGGTGCTAA ACCAATTCCA CTTTCATTTA AACCAACAAA CTCTAAATTA
GATTTTAGAA ATGATAGTTT ATTTGGACCA GTAGGAAGTA TCATAAATAA AGAATTAACA
GTTGATGAAT GGATTAATAA CTTAGAATCT GATTCACAAA CTCTTGCTAA AGAAGTTGTT
GAATAA
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| Protein sequence | MKRKLVKMLT VACVTAIAAS AFVGCGNKEE TPKDNEKPST EQAEGSGEKK VLEIAVFEGG
FGKDYWEACI EAFEAEHPDV EVKMEANPKI GDIIRPKLSS EKTPDFIYLS TNDPSGIANA
LIKDKALVDL SDVFDREDPD NPGQKLKDKI LPGFLDTPLT TPYGDGKVFL APLYYNVTGM
WYNKALFKEK GWEVPKTWDE FFELGKKAKD EGIALYTYQG QAPGYNEAVI FPMLASAAGE
ETVEKIFNYE EGAWKDPNVK KALDIFQRMA DEDMVLNGTV GMTHTQAQVE FLNGKALFLP
CGSWLEGEMK DAIPEGFEFG FMAPPAFKEE DTPYVTTTIE QMYIPAKSDQ VELAKEFLAF
QYTDAMVKKN AEIAKAVVPV KGAVEKAKSS LDASGYESYK VVEEGAKPIP LSFKPTNSKL
DFRNDSLFGP VGSIINKELT VDEWINNLES DSQTLAKEVV E
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