Gene CPR_0529 details

Gene Information

• Locus tag: CPR_0529
• ID: 4204785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 628052
• End bp: 628720
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 642565086
• Product: N-acetylmuramoyl-l-alanine amidase, putative
• Protein accession: YP_697857
• Protein GI: 110802242
• COG category: [V] Defense mechanisms
• COG ID: [COG3023] Negative regulator of beta-lactamase expression

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.549299
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAGCATA ATAAAATTAA GAATATTAAT CTATCAAAGA GAAGAAAAAA GATTTTTAGA 
AGAAGACTTA TATTTTTAAT TAGTATTATA TTGATTATTT GTGGGAGTAT TTTCTTTGTT 
TTTTCTAAAA TGAATAAAGA TGAGAGTTAT AGAGATGCTT ATAAAAAGAA TATTTCAAGT 
AGAGAGTTAG AAAAAATGAG GCAGGAATTA GATATAAAGG AAGTTGATTA TAAATGGGGA 
AGTGGGCTTA AAAATGGGAA TTCACCTAAA AGATTAATTA TTCATCATTC AGCAACAGAT 
TCACCAGAAA CTCCAGAAGA TATTCATAAG TTTCATTTAG ATAATGGATG GAGTGGAATA 
GGATATCATT TTTATATAAG GGAGGATGGG ACAATTTATA AAGGTAGAGA TGAAAATGTA 
ATAGGAGCTC ATGCAAAAAA TGCAAATTAT AATACCTTAG GAATATGCAT TGAAGGAAAC 
TTTGAAAAAG AGGGTTTAAA AGAGGCGCAA AAAAATTCAC TTGTTAAACT AGGAACTTAT 
TTAAGCTTAA AATATCCAAT AAAAGATATA CTTCCACATA GGGAAGTTGT GGATACTTTA 
TGTCCAGGCA CACTTTTTCC AATGGATAAT ATAAAAAGTA GTATTATTGA GGAAATAAAG 
AATATATGA 

 

Protein sequence

MEHNKIKNIN LSKRRKKIFR RRLIFLISII LIICGSIFFV FSKMNKDESY RDAYKKNISS 
RELEKMRQEL DIKEVDYKWG SGLKNGNSPK RLIIHHSATD SPETPEDIHK FHLDNGWSGI 
GYHFYIREDG TIYKGRDENV IGAHAKNANY NTLGICIEGN FEKEGLKEAQ KNSLVKLGTY 
LSLKYPIKDI LPHREVVDTL CPGTLFPMDN IKSSIIEEIK NI