| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0525 |
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| Symbol | |
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| ID | 4206594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 623002 |
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| End bp | 623823 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642565082 |
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| Product | PTS system, trehalose-specific IIB component |
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| Protein accession | YP_697853 |
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| Protein GI | 110801824 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.346126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGT TTGAAAAAGA TGCAAAGTTA CTAACAGAGT ACATAGGCGG AAAAGAAAAC
GTAGCTGCAG TTACTCACTG TGCTACAAGA ATGAGATTCG TTTTAAATGA TACAAGCAAA
GCAGATGTTG AAAAAATAAA AGCTATTCCT TGTGTAAAAG GGACTTTTAC CCAAGCAGGA
CAGTTTCAAG TAATAATTGG ACCAGAAGTT GCAACTTTTT ATAATGATTT TGTTGGACAG
ACTGGAGTAT CTGGAGAAAG TAAGGAAGAA GTCAAGAAGG CTGCCAAGAA GAATATGAAT
ATAGTTCAGA GAGCCGTTGC AGGCTTAGCA GAAATATTTG CTCCATTAAT ACCAGCTATC
ATAGTTGGAG GTCTTATATT AGGATTCCGT AATGTAATCG GAGATATGAA ATTATTTGAA
GATGGAACTA AGAGTTTAGT TGAAATTTCT CAATTCTGGG CAGGAACACA TAGTTTCTTA
TGGTTAATAG GGGAGGCGAT ATTCCACTTT TTACCTGTAG GGGTTGTTTG GTCAATTGCT
AAGAAAATGG GAGCAGATCA AATGCTAGGA ATAGTTATTG GTATAACTTT AGTATCTCCA
CAATTATTAA ATGCATATAG TGCAGGTAAT GGAGCAGCTG CTCCAGTTTG GGACTTTGGA
TTTGCTCAAG TTCCAATGAT AGGATATCAA GCACAAGTTT TACCAGCAAT CATGGTTGGA
TTCACTTTTG TTTACTTAGA AAGATTATTT AAGAAGATTA CACCAGGACC AATACAAATG
ATAATAGTAC CATTTTTCTC AATAAGAAAC TTATTGAATT AA
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| Protein sequence | MSKFEKDAKL LTEYIGGKEN VAAVTHCATR MRFVLNDTSK ADVEKIKAIP CVKGTFTQAG
QFQVIIGPEV ATFYNDFVGQ TGVSGESKEE VKKAAKKNMN IVQRAVAGLA EIFAPLIPAI
IVGGLILGFR NVIGDMKLFE DGTKSLVEIS QFWAGTHSFL WLIGEAIFHF LPVGVVWSIA
KKMGADQMLG IVIGITLVSP QLLNAYSAGN GAAAPVWDFG FAQVPMIGYQ AQVLPAIMVG
FTFVYLERLF KKITPGPIQM IIVPFFSIRN LLN
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