| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0521 |
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| Symbol | |
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| ID | 4204141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 618058 |
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| End bp | 619194 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565078 |
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| Product | glycine betaine/carnitine/choline transport ATP-binding protein |
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| Protein accession | YP_697849 |
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| Protein GI | 110802671 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.691197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAA TAAAAAATGT ATCTAAACAA ATAGGGGACA GAAAGATACT AGATAATATT
TCTTTAACTA TTGATAAAGG AAGTCTAGTT GTTTTAATAG GTTCTAGTGG ATGCGGTAAA
ACAACTACTT TAAAACTTAT AAATAAGTTA ATAACACCTA CTTCTGGTGA AATATTTATA
AATGGGAAAT CTTTAGCCAA GGAAAACCCT ATTGAATTAA GAAGAAATAT TGGATACGTA
ATTCAGAATA ATGGATTGTT TCCACATTTA ACAATAAAGG AAAATATAGA GCTTATTCCA
AGACTAAAAA AGGGCAAAGA TGTTGAAAAA ATAGAGCAGA CAACTTTAGA CCTTTTAAAT
ATGGTTGGAT TAGATCCTGA AATTTATTTA AATAAGTATC CATCAGAGCT TAGTGGAGGA
CAACAACAGA GAGTAGGTTT TGCAAGAGCC TTTGCTACAG ATGCTGAGAT AATTTTAATG
GATGAGCCCT TTAGTGCTTT AGATCCAATA ACTCGTACTT CACTTCAGGA AGAGCTTTTT
ACTATTCAAG AGGAACTTAA AAAGACAATT ATTTTTGTTA CTCATGATAT GGACGAAGCT
TTAAAGATAG CAGATAAAAT ATGCATAATG AATGGAGGAA AAATAGCTCA ATATGATACT
CCAGAAAATA TACTTAGAAA TCCAGCAAAT GATTTTGTTA GAGATTTTAT AGGATCAGAT
AGGGTTTGGA ATAATCCTGA CTTCATAAAA GCAAAGGATA TAATGATAAA AAATCCTGTA
TCTGTTAAAG GTGCTAGAAC CATATTACAG GGAATTGAAA TAATGAGAAG TAATAAGGTT
GATAGTTTAT TAGTTATTGA TAAAGAAAAT GTACTTAAAG GTATTGTTAC TTTTAAAGAT
ATAAAAATTA CAAATGAAAA ATCAAGAGTA CTTTCAGAAA TTATGAGTGA AAATCCACTA
AGAGTTAATG AAGATGATAG TTTGGTTGAT ATTTTAACTG TAATGAATGA AAACTCAGTA
GGATTTATAC CTGTTGTTAA CTCGGAAGAA AAATTGGTAG GGCTTATAAC AAGAAGTAGT
TTACTTTCAA TATTAAGCGA CCAATTCTTA GACATGGAGG TGAATATATT TGAATAG
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| Protein sequence | MIEIKNVSKQ IGDRKILDNI SLTIDKGSLV VLIGSSGCGK TTTLKLINKL ITPTSGEIFI
NGKSLAKENP IELRRNIGYV IQNNGLFPHL TIKENIELIP RLKKGKDVEK IEQTTLDLLN
MVGLDPEIYL NKYPSELSGG QQQRVGFARA FATDAEIILM DEPFSALDPI TRTSLQEELF
TIQEELKKTI IFVTHDMDEA LKIADKICIM NGGKIAQYDT PENILRNPAN DFVRDFIGSD
RVWNNPDFIK AKDIMIKNPV SVKGARTILQ GIEIMRSNKV DSLLVIDKEN VLKGIVTFKD
IKITNEKSRV LSEIMSENPL RVNEDDSLVD ILTVMNENSV GFIPVVNSEE KLVGLITRSS
LLSILSDQFL DMEVNIFE
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