Gene CPR_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0508 
Symbol 
ID4204043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp602050 
End bp602730 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content26% 
IMG OID642565065 
ProductTrkA domain-containing protein 
Protein accessionYP_697836 
Protein GI110801450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.206183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTTTAG TACTTACATT TATTTTATTT TTAATGATAT TTTTAATAAT AGTAGATTTT 
TTTGCTATAT TATTTAGACT TACAGGGGTG CCAATAGAAA AAGCCAGATT TCAAGTTACA 
TCTCTTTTGA CAGGAACAGG TTTTACAACA AAAGAAAGTG AAATAATAGT TCAACATCCT 
ACTAGAAGAA AGCTTGCTAT TTGGCTCATG GGATTTAGTT ATGCAAGTAC AGCAACTATT 
ATATCTTTTG CAGTAAATAT AATAACTAGT AGTGTTATAG ATGTAGGTTC CATAGCTGTA 
ATTGTTCTTT TTATTATATT TGTTTTGTTT TTTCATAAAA GTTCTTTATT AGAAAAGTTT 
GAAAATAAAA TTGAGAAATT TATTGTTCAA TCTAAAATTT GGGACAAGAT TAATTCAAAG 
CATTTAACTT TAATAACAAA CACTAAAGGA TTTGGAGTTT ATGAAATATA TCTTTCAAAC 
AAGACAACGC TTATTGGAAA GAGCATAAGA GATAGCAACC TTAAAGCAAA TGAAATAGAA 
GTTTTAAATA TAGATAAAGG GGACAAGTTT GTTAATTTTC CAACACCTGA TTATACTTTT 
GAAATTTGTG ACAAGGTAAC AGTCTATGGT AATGTTAAAA ATATAAAGAA TATGTTTAAG 
CATATAAATG AAGTTAAATA A
 
Protein sequence
MVLVLTFILF LMIFLIIVDF FAILFRLTGV PIEKARFQVT SLLTGTGFTT KESEIIVQHP 
TRRKLAIWLM GFSYASTATI ISFAVNIITS SVIDVGSIAV IVLFIIFVLF FHKSSLLEKF 
ENKIEKFIVQ SKIWDKINSK HLTLITNTKG FGVYEIYLSN KTTLIGKSIR DSNLKANEIE 
VLNIDKGDKF VNFPTPDYTF EICDKVTVYG NVKNIKNMFK HINEVK