Gene CPR_0505 details

Gene Information

• Locus tag: CPR_0505
• ID: 4205180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 599399
• End bp: 600109
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642565062
• Product: ISCpe2, transposase orfB
• Protein accession: YP_697833
• Protein GI: 110802052
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0675] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAGA AAGCATATAA ATTTAGAATA TACCCAACTA AGAAACAAGC CGAGCTAATT 
AACAAGACTA TTGGATGTTG TAGGTTTGTA TTCAACTATT CTTTAGGTGT TCAAAAAACT 
AAAGATAATT ATTGGAATAT AGTTGAGGAG ATGGTTCAAC AAGGCTACTT CCAAGAGAAT 
AATTGGAAAG GCGAGTTCTT TAATAAAGCC AATTCAATTA AAGATATAGC TAAATTAAAG 
AAAAGCTATG ATTGGCTTAA AGAAGTAGAT AGCATAGCAC TACAGGCTTC TGTTGAAAAT 
CTTGGTGCTG GATATGATAA GTATTACAAA AAAATAGGTG GCAAACCTAA ATTTAAGTCT 
AAGAAAAATG AAATACAATC TTATACTACT AAATTAGTAA AAGCTAAGGG TAATGTAAAT 
ATTGAGATAG TAGGTAAAAG AATTAAACTA CTTAAACTTG GATTAGTTAA GATAGAAAAT 
TCAAGAAATG TAGATGGAAA TATTAAAAGA GTTACTGTGA GCAGAACACA ATCTGGTAAA 
TATTTTGCAT CTATTCTTTG TGATGTAAAT ATTCAAGAAT TACCTAAAAT AGATAAAAAA 
GTTGGTGTAG ATGTTGGATT AAAAACTTTT GCTGTTTGTT CTGATGGATA TGAAGAAGCT 
AATCCTAAAC ACTTTAGAAA GGCAGAAAAA AGACTTATTA AACTTCAATG A 

 

Protein sequence

MRKKAYKFRI YPTKKQAELI NKTIGCCRFV FNYSLGVQKT KDNYWNIVEE MVQQGYFQEN 
NWKGEFFNKA NSIKDIAKLK KSYDWLKEVD SIALQASVEN LGAGYDKYYK KIGGKPKFKS 
KKNEIQSYTT KLVKAKGNVN IEIVGKRIKL LKLGLVKIEN SRNVDGNIKR VTVSRTQSGK 
YFASILCDVN IQELPKIDKK VGVDVGLKTF AVCSDGYEEA NPKHFRKAEK RLIKLQ