Gene CPR_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0503 
Symbol 
ID4205134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp597909 
End bp598550 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content30% 
IMG OID642565060 
Producthypothetical protein 
Protein accessionYP_697831 
Protein GI110803207 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTT TATCTATTGT TTTAACTGGT TTTGGCCTTG CTATGGATGC TTTTGCCGTA 
TCAGTTGCTA AGGGAATAAC CCTAACTAGA GTAAAAGCTA AAGATGCATT AAAAGTTGCT 
TTATTCTTTG GAGGATTTCA AGCGCTTATG CCTTTAATAG GATGGGGAGC TGGGAGATAT 
TTCGCTGATT ATATAAAAGC TTTTGATCAT TGGATAGCAT TTATATTATT AGGTTTCATA 
GGGGGAAAAA TGATTTTTGA AGCTTTAAAA GAAGAGGATG AAGAAAAAGC TGAGGTTGCA 
GTATCAATGG AAGTTAACAA AAATAAAGAG AGAGAATTTG CTAATATGAA ACGCAAAGAG 
GAGTTAAGTG CTAAAAATCT TACTGTATTA GCTATTGCAA CTAGTATTGA TGCCTTAGCA 
GTTGGGGTTA GTTTTGCATT CTTAGGTATT TCTATAGTTC AAACTATAAT AATAATTGGT 
ATTATAACTT TTGTTTTATG TTTTTTAGGG GTAATAATAG GTGAAAAATT AGGAGATATA 
TTTAAAAACT ATGCTGAAAT AGTAGGTGGA GTTATATTAA TTCTTATAGG TATAAATATA 
TTATTAGAAC ATACAGGAAT TATTGAAAAG TTATTTTCTT AG
 
Protein sequence
MSILSIVLTG FGLAMDAFAV SVAKGITLTR VKAKDALKVA LFFGGFQALM PLIGWGAGRY 
FADYIKAFDH WIAFILLGFI GGKMIFEALK EEDEEKAEVA VSMEVNKNKE REFANMKRKE 
ELSAKNLTVL AIATSIDALA VGVSFAFLGI SIVQTIIIIG IITFVLCFLG VIIGEKLGDI 
FKNYAEIVGG VILILIGINI LLEHTGIIEK LFS