Gene CPR_0501 details

Gene Information

• Locus tag: CPR_0501
• ID: 4204758
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 595944
• End bp: 596612
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 642565058
• Product: two-component response regulator
• Protein accession: YP_697829
• Protein GI: 110802274
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4565] Response regulator of citrate/malate metabolism

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGA AGATACTTAT AGTAGAAGAT GATCCAATGG TGGCTCTTAT TAATAAAAGA 
TTTTTAGAAA ATATGGGCTT TAAAGATATA TTAGGACCAG TACAAACTGA GGAGGAAATA 
ATACAGCTAT TAGATAAAGA AAATATTGAT TTAATTCTTT TAGATGTATA TCTTCCTAAG 
AAAAATGGTA TTGATATATT AAAAAGTTTA AGGTACAAGA AGTATTTAAC TGATGTAATA 
ATGATAACTG CTGCAAATAG TGTTGAAGAG GTGAAGAGAG CCTTTGCTTA TGGGGTAACT 
GATTACTTAG TTAAGCCTTT TGAATTTGAA AGGTTTGAGG AGGCTATAAA TAAGTATAAA 
CAAAAAAATA ATCTTTTAAA TAAGAGAGAG GCTTTAAGTC AGCAGGATAT AGATGTTATT 
TCAAAATCTT TAGAGGAAAA GATTGAATTA CCTAAGGGAT TAAATCAAAA AACTTTAGAT 
AGAATAATGG AGTTTTTAAA AGAAAATAAA GGAAAGGTTT GGACACTAAG AGAAATAGCC 
TATGAATTAA AAATAAGCAA TGTAACAATA AAAAAATATA TGGATTACTT AGAAGATATT 
AAAAAGGTAA ATGTAACACT AACTAGTGGA AATGTTGGAA GACCTGAATA TAAATACACT 
CTAGGTTAA 

 

Protein sequence

MEKKILIVED DPMVALINKR FLENMGFKDI LGPVQTEEEI IQLLDKENID LILLDVYLPK 
KNGIDILKSL RYKKYLTDVI MITAANSVEE VKRAFAYGVT DYLVKPFEFE RFEEAINKYK 
QKNNLLNKRE ALSQQDIDVI SKSLEEKIEL PKGLNQKTLD RIMEFLKENK GKVWTLREIA 
YELKISNVTI KKYMDYLEDI KKVNVTLTSG NVGRPEYKYT LG