Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0494 |
Symbol | |
ID | 4206144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 585931 |
End bp | 588228 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642565051 |
Product | uncharacterized ABC transporter, ATPase component |
Protein accession | YP_697822 |
Protein GI | 110803777 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAGC TAATTAAATA CTTAAAACCA TTTACGGCAT CAATTTTAGC TGTTATAGTA CTTCTTTTTG CTCAGGCAAT GTTTGATTTA TCTTTACCAG ATTACATGTC AAACATAGTC AATGTAGGAA TTCAGCAAGG TGGTATAGAA AATGCTGTTC CAAAAGTAAT TAGTAAATCA GAGTTTGATA AACTGACACT TTTTATGAGC AAAGATGAAA AAGAAAAAGT AGAAAGTAAT TATACGTTGT TAGATAAAGG TAACCTTCCT AAAAGTGAGT ATGATAAATA TGTAAAAGAT TATCCTGCTT TAGAGAAGGA GAATATTTAC AAATTAAATA CTAAGGATAA AGAGATAATT AATGAATTAA ATCCTATTAT GGGTAAGGCA ATGATAGTTG TAGGTGGAAT TGAAGAAAAG GGCCTACAAG GAGTAATGGG AAATTCATCT CTTACAGGAG CTTCTGATAA TTTCAAGGCT AATATGGAAG AAAGTGCTCC TAAAGAAGGA AAAATACAAG GAATGCCTGC TAATACAGAT CCATTTTTTA TGATTAAAAA TATGCCAGAG GCACAAAAGA ATGATATGCT TAAGCAAATT AATGAGAAAT TTGAAAGTAT GCCAGAGAGT ATGGTTACTC AAACAGCAGC CACTTTTATT AAAGATCAAT ATACTGATTT AGGCATGAAT ATAGAGAAGA TACAAAGCCA ATACATACTA AAAACTGGAG GAATAATGAT TCTTTTAGCC TTTGGAAGTA TGATTGCAGC AGTATCAGTA ACATTAATAG CCGCGAGAGT GGCAGCAGGA TTTGGAAGAA ATCTTCGTAG TAAAGTTTTT GGAAAAGTTG TTAGATTTTC AAATGCAGAA TTTGATAAAT TTTCAACAGC TTCCCTTATA ACTCGTAGTA CAAATGATAT TCAACAAATA CAAACTCTTA TGGTTCTACT TCTTAGAATA GTTTTCTATG CACCTATCTT AGGTCTAGGA GGTATTTTTA GAGTTGTAAA AACAGATACT GGAATGTCAT GGATAATAGC TGTAGCCCTA GCTGCTATAC TTTCTTTAGT AATAGTTTTA TTTGGACTTG CTATTCCAAA ATTCAAGTTA GTTCAAAAGC TTGTTGATAA ACTTAACTTA GTAGCTCGTG AATCACTTAC AGGAATGTTA GTAATCCGTG CCTTTAATAC AGAAAAATAT CAAGAGAATA AGTTTGATGG TGTAAATAAA GATCTTACTA GAACAAATCT TTTTGTTAGT AGAATAATGG GTGGAATGAT GCCACTTATG ATGCTTATAA TGAACCTTAT AACTATTCTT ATAGTATGGG TTGGTGCTCA TAATGTAAAT GATGGAGTTA TGCAAGTTGG GGATATGATG GCATTTATTC AATACACAAT GCAAATCATA ATGGCATTCT TAATGATATC TATGGTATCA GTAATGCTTC CAAGAGCATC AGTTTCAGGT CAACGTATAG CTGAGGTTTT AGAAACTAAA GAAAGCATAA AAGACCCTGA AAAGAATCAT GAGTTTAATA AAAATAAAAA AGGATATGTT GAATTTAAAA ATGTTTCATT TAAATATCCT GGTGCAGAGG AATATGTTTT AAAAGATATT TCATTTACTG CAAAGCCTGG GGAAACAACT GCCTTCATTG GAGGAACTGG TAGTGGTAAA TCTACTTTAG TTAATTTAAT ACCACGTTTC TATGATGTTA CAGAAGGTGA AATCTTAGTT GATGGAACAG ATATAAGAAA AGTTTCTCAA CATGATTTAA GAGAAAAAAT AGGTTATGTT CCTCAAAAGG GAATATTATT CTCAGGTACT ATAGAAAGTA ACTTAAAATA TGGTAATGAG GATGCATTAT TAGAAGAATT AGAAGAGGCT GCAAATATTG CTCAAGCTTC TGAATTTATA AATACTAAAG CTTTAAAATA TGCAGAGGAA ATTTCACAAG GTGGTACTAA CGTATCTGGT GGACAAAAAC AAAGACTTTC AATTGCTAGA GCTTTAGTAA AAAATCCTGA TGTATATATT TTTGATGATA GTTTCTCAGC TCTTGACTTT AAAACAGATG CAGCTGTTAG AAAAGCTCTT AATGAGAAAA CATCACATAG TACAATGCTT ATAGTTGCAC AAAGAATAAG CACAATTATG GGAGCTAATC AAATAATCGT ACTTGATGAA GGTAAGATTG TTGGTAAGGG AACTCATAAA GAACTTCTAG AAAATTGTGA GGTTTATAAG CAAATAGCTT TATCTCAACT TTCAAAGGAG GAGCTAAGTA ATGAGTAA
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Protein sequence | MSKLIKYLKP FTASILAVIV LLFAQAMFDL SLPDYMSNIV NVGIQQGGIE NAVPKVISKS EFDKLTLFMS KDEKEKVESN YTLLDKGNLP KSEYDKYVKD YPALEKENIY KLNTKDKEII NELNPIMGKA MIVVGGIEEK GLQGVMGNSS LTGASDNFKA NMEESAPKEG KIQGMPANTD PFFMIKNMPE AQKNDMLKQI NEKFESMPES MVTQTAATFI KDQYTDLGMN IEKIQSQYIL KTGGIMILLA FGSMIAAVSV TLIAARVAAG FGRNLRSKVF GKVVRFSNAE FDKFSTASLI TRSTNDIQQI QTLMVLLLRI VFYAPILGLG GIFRVVKTDT GMSWIIAVAL AAILSLVIVL FGLAIPKFKL VQKLVDKLNL VARESLTGML VIRAFNTEKY QENKFDGVNK DLTRTNLFVS RIMGGMMPLM MLIMNLITIL IVWVGAHNVN DGVMQVGDMM AFIQYTMQII MAFLMISMVS VMLPRASVSG QRIAEVLETK ESIKDPEKNH EFNKNKKGYV EFKNVSFKYP GAEEYVLKDI SFTAKPGETT AFIGGTGSGK STLVNLIPRF YDVTEGEILV DGTDIRKVSQ HDLREKIGYV PQKGILFSGT IESNLKYGNE DALLEELEEA ANIAQASEFI NTKALKYAEE ISQGGTNVSG GQKQRLSIAR ALVKNPDVYI FDDSFSALDF KTDAAVRKAL NEKTSHSTML IVAQRISTIM GANQIIVLDE GKIVGKGTHK ELLENCEVYK QIALSQLSKE ELSNE
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