| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0479 |
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| Symbol | |
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| ID | 4206446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 569581 |
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| End bp | 570330 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 23% |
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| IMG OID | 642565036 |
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| Product | sortase family protein |
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| Protein accession | YP_697807 |
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| Protein GI | 110801775 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4509] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03064] sortase, SrtB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATT CATTAAGAAT TAAAAAAATA ATAAGTTTAA TTCTATTAAT TATAATTTTC
TTTTGTGCAA TTAAAATATA TCAAAAACGT TTAGGATATT ATACTGATTC AAGAGATTAT
GATAACTTAA GAAGTCTTTC TCCTCTATCT GATTCTTCTA TTAACAAAGA TCCAGAGGAA
AACAAGAAAG ATATAGAGAA TGAAAAAAAT TTAAAAAATA TAAATTCAGA CTATAAATTT
TGGATAAATG TTGAAGGAAC TAATATAGAT TTTCCAGTGA TTCAAGGAAA AGATAATGAT
TTCTACTTGC ATCATAACTT TAACAAAGAA AAAAGCTTCT CAGGTTCAAT TTTCGTTGAC
TCAGAAAATA ATTTAAATGA TGATTCTAAT CTAGTTGTTT ATGGTCATAA CATGAGAAAT
GATACTATGT TTGCTCAAAT TAAACATTTT AAAAATGAAA ATTTCTTCAA TGCAAATAAA
TATGTAACTC TTTATAGAGA AGGAAAAAAA TCAACATTTG AAATTTTTTC AGTTTACCAA
GAAAATGCTA AGGACTTAGA ATCTCAAATA AAAATCAAAT TTTCAAATAA AGAGGATTAT
GAAAAATATT TAAAAGAACA AGAAGAAAAA TCACTATTTA AAAGAGAAGG AATAGATTTA
AAGGATAATG ATAGAATCTT AACTTTAGTA ACCTGTGGAT ATGATTTTGT TAACGCGAGA
ATAGTAATTG TTGCAAAAGA AGTTAATTAA
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| Protein sequence | MKNSLRIKKI ISLILLIIIF FCAIKIYQKR LGYYTDSRDY DNLRSLSPLS DSSINKDPEE
NKKDIENEKN LKNINSDYKF WINVEGTNID FPVIQGKDND FYLHHNFNKE KSFSGSIFVD
SENNLNDDSN LVVYGHNMRN DTMFAQIKHF KNENFFNANK YVTLYREGKK STFEIFSVYQ
ENAKDLESQI KIKFSNKEDY EKYLKEQEEK SLFKREGIDL KDNDRILTLV TCGYDFVNAR
IVIVAKEVN
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