| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0478 |
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| Symbol | |
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| ID | 4206265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 568664 |
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| End bp | 569491 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642565035 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_697806 |
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| Protein GI | 110803664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA AAATTAAAAC TAAGAAGATA TTAATACATG GAGCACTTAT ATGTGGAGCG
TTAATAATGA TAGTACCCTT TTTATGGATG GTTTTAACTT CATTAAAAAC TATGGGAGAG
GCAACACAGG TTCCACCAAA AATTTTCCCA AGTAAACCTA TGTATGAAAA TTATTCAGAA
GTTTCAAGAT TATTACCTTT TGGTAAGTTT TATATGAATA CAATAATTAT GCTTATTTTT
AGAGTTGTAG GATCTGTTTT CTTTAGTGCT ATGGCTGCAT ATGCTTTTGC TAGGTTAAAT
TTTCCTGGGA AGAAAATATT TTTTGCATTA GTTTTATTTC AAATGATGAT TCCAGCGCAA
ATTTTTATAG TTCCTCAATT TTTACTAGTT CAAAAGTTAG GATTATTAAA TACTATTTCA
GCTTTAGTCA TTCCAGGTAT AGTAAGTGCT TTTGGAACTT TCCTCTTAAG ACAATTTTTT
ATGGGACTTC CTAAGGAGTT AGAAGAAGCG GCTAAGTTAG ATGGGTGTAA TACATGGCAA
ACTTTTTATA AAGTTATGTT GCCTTTAGCA AGATCTGGAT TAGTTGCCTT AGGTATATTT
ACAGCGTTAT TTGCATTCAA AGATCTTATG TGGCCATTAG TTGTTAATAT GTCTGTTGAT
AAAATGACAT TATCAGCTGG ATTAGCATCA TTACAAGGGC AATTTTCAAC TAATTATCCT
CAGCTTATGG CTGGTTCAGT ACTTGCTATT TGGCCTATGT TAATTATATT TGTAATATTC
CAAAGAAAAT TCATAGAAGG AATAGCAACA TCAGGCTCAA AATTATAA
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| Protein sequence | MDKKIKTKKI LIHGALICGA LIMIVPFLWM VLTSLKTMGE ATQVPPKIFP SKPMYENYSE
VSRLLPFGKF YMNTIIMLIF RVVGSVFFSA MAAYAFARLN FPGKKIFFAL VLFQMMIPAQ
IFIVPQFLLV QKLGLLNTIS ALVIPGIVSA FGTFLLRQFF MGLPKELEEA AKLDGCNTWQ
TFYKVMLPLA RSGLVALGIF TALFAFKDLM WPLVVNMSVD KMTLSAGLAS LQGQFSTNYP
QLMAGSVLAI WPMLIIFVIF QRKFIEGIAT SGSKL
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