| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0456 |
|---|
| Symbol | |
|---|
| ID | 4204131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 542179 |
|---|
| End bp | 543408 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642565013 |
|---|
| Product | UDP-glucose/GDP-mannose dehydrogenase family protein |
|---|
| Protein accession | YP_697785 |
|---|
| Protein GI | 110801556 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000210605 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TAAATGTTAT TGGATTAGGA TATATAGGAT TGCCAACAGC ATTATCATTT
GCAGGTGTAG GAATTGCGGT AATAGGAACA GATTATAACA AAGAAATAGT TGATACATTA
AATAATGGAA AAGTTACTTT TAAAGAAGAT GGATTATATG ACTTATATAA GGAGGCTTTA
AATAAAGGAG TAGAATTTTC AAGCGAGTAT GCTAAAACTA ATAAATATAT AATAACTGTA
CCTACACCAT ATATAAAAGA AAGTAAAAAA TTAGATGCCC AATATGTTAT TTCTGCAGTG
GAAAGTGTAT TAGATGTTTG TGATAAAGGA ACAATACTTG TAATAGAATC AACAGTTTCA
CCAGGGACAA TGGATAAGTT TGTAAGACCA ATAGTTGAAA ATAGAGGTTT TAAAATTGGA
GAAGATATTC ATTTAGTACA TGCTCCAGAA AGGATAATAC CAGGAAATAT GGTTAATGAA
TTAAAAAATA ATTCAAGAAC TATAGGTGCT GATAATATTG AAATAGGCTA TGAAGTTAAA
AGATGGTATG AAACTTTTTG TGAGGGTGAG ATAGTTGTTA CAGATATTAA GACAGCTGAG
CTTTCAAAAG TTGTTGAAAA TACATTTAGA GATATAAATA TTGCTTTTGC AAATGAACTT
TCAAGAATTT GTAGAAAAGA GAATATTGAT GTGTATAAGT TAATAAATAT AGCCAATAAG
CATCCAAGAG TAAATATACT TACACCAGGG CCAGGGGTTG GTGGTCATTG TATATCTGTA
GATCCATGGT TTTTAGTAGG AGATTATCCT GAAATAGTAA ATATAATTAA GGCTGCTAGA
GAAGTTAATG ATTCACAACC GGATTTTGTT ATAGATAGAA TAAGAGATGT CATGAATGAA
AATGGAATAA CAGATATATC AAAAGTTGGT TTATATGGAC TTACATATAA AGAAAATGTT
GATGATTTAA GAGAAAGCCC AACTCTTCAA ATATTAGAGA AATTAGAAAG ATATTTTGTA
AAAGGAATAA AATTATATGA TCCTTGGATA GAAGAAAAGA AATTTGAAAA TCAATATAAT
AATTTCAATG AATTTTTAGA TGACGTAGAA TTAGTAGTAT TACTTGTAGC ACATGATCAT
ATAAAGGAAT TTAAGGATAT GTTAAATGAA AAAATAGTAC TAGATACTAA AAATATTTTA
AAGTTAAGCA AAAATATATA TACTCTTTAA
|
|---|
| Protein sequence | MKKLNVIGLG YIGLPTALSF AGVGIAVIGT DYNKEIVDTL NNGKVTFKED GLYDLYKEAL
NKGVEFSSEY AKTNKYIITV PTPYIKESKK LDAQYVISAV ESVLDVCDKG TILVIESTVS
PGTMDKFVRP IVENRGFKIG EDIHLVHAPE RIIPGNMVNE LKNNSRTIGA DNIEIGYEVK
RWYETFCEGE IVVTDIKTAE LSKVVENTFR DINIAFANEL SRICRKENID VYKLINIANK
HPRVNILTPG PGVGGHCISV DPWFLVGDYP EIVNIIKAAR EVNDSQPDFV IDRIRDVMNE
NGITDISKVG LYGLTYKENV DDLRESPTLQ ILEKLERYFV KGIKLYDPWI EEKKFENQYN
NFNEFLDDVE LVVLLVAHDH IKEFKDMLNE KIVLDTKNIL KLSKNIYTL
|
|---|
| |