Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0454 |
Symbol | |
ID | 4205775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 541348 |
End bp | 542016 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642565011 |
Product | glycosyltransferase, putative |
Protein accession | YP_697783 |
Protein GI | 110802943 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000102874 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGAAT CTATGGAGAA GATTCAAGAA GGAAAAGAAT ATATAAAAGT AGATCAAGGA AATAGAGTAT ACTTATTTTT TAAGAGAGTA ATGGATATCC TTGGATCAGG CTTTGGATTA ATCACATTAA GTCCATTATT TTTGATTGTA GCAATAGCTA TAAAATTTGA AGATAGCAAG GGGAGTGTAC TATTTTCACA AAAAAGAGTT GGACAGTATG GTAAAGAATT TAATATGTAC AAGTTTAGAT CCATGGTTAG TAATGCAGAA GAGCTTAAAG CTAAGCTTAT GGAGCAAAAT GAAATGTCAG GACCTATGTT TAAAATGAAA CATGATCCTA GAATAACTAA GGTTGGAAAG TTTATAAGAA AAACTAGTAT AGATGAACTT CCTCAGCTTA TAAATATTCT TAAGGGTGAA ATGAGCTTAG TTGGTCCTAG ACCAAGCCTT CCAAAGGAAG TAGCTAAATT TGAACCTTGG ATGTTAGAAA GGTTAGAAGT GAAGCCAGGA TTAACATGTT ATTGGCAAGT TATGGGGAGA AATGATATAG ATTTTGAAGA TTGGATGAAG CTTGATATAA AGTATGTTCA TGATAGAAAT CTTTTTTTAG ATATAAAATT GATTTTTAAA ACATTTTTTG TTCTTTTTGG AGATGAAAGT GCAAGTTAA
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Protein sequence | MYESMEKIQE GKEYIKVDQG NRVYLFFKRV MDILGSGFGL ITLSPLFLIV AIAIKFEDSK GSVLFSQKRV GQYGKEFNMY KFRSMVSNAE ELKAKLMEQN EMSGPMFKMK HDPRITKVGK FIRKTSIDEL PQLINILKGE MSLVGPRPSL PKEVAKFEPW MLERLEVKPG LTCYWQVMGR NDIDFEDWMK LDIKYVHDRN LFLDIKLIFK TFFVLFGDES AS
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