Gene CPR_0452 details

Gene Information

• Locus tag: CPR_0452
• ID: 4206330
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 539783
• End bp: 540481
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642565009
• Product: chain length determinant protein
• Protein accession: YP_697781
• Protein GI: 110803362
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3944] Capsular polysaccharide biosynthesis protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000687641
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAAA ATACTATAAG CTTACAAGAA ATTGCTTATG CTTTAAAGAA GAGATGGAAA 
CTAATTGCAC TAATAACAAT AGCTGCTACC TTAGTTTCAG CAATATTAAG TTTTTTTGTA 
ATAAAACCAC AATATGAGGC AAAAACTAAG CTTTTTATTG GTAAGCAAGA AACAAGTCAA 
AATGCAGCAA ACTATGATAA TAATGATATT ATGATGTATC AAAAACTTAT GAAGACTTAC 
GCAGAACTTG CAAAAACTTC AGATTTAGTT ACTAAGGCAG TTAAAAATGC TAAATTAGAT 
TACAATCAGA ATGAAATAAA AGGGGTTTTA AATAATCTTA ATGTTACTCC AAGTGCTGAT 
ACTCAAATAT TAGATTTAAG CTTTAAGGGA AAAAATCCTA AGGAAGTTTT AAAGGTAACA 
GAGGCTATAA CAGATGAATT TATTTCAGAA TCCAAGGAGC TTATTCCAAA TGGAAATGTA 
CAAGTTATAC AAAAACCACA GCTTCCAGAA AATCCAGTAA GTCCAAATAA GAAGCTGAAT 
ATACTTATTG CTTTTGTTTT AGGTCTTATG ATAGGAGTAG GAATAGTACT TTTACTTGAA 
TACTTAGATA ATACATTTAA ATCAAGAGAA GAACTGGAAA AAACTTTAGA TTTACCTATA 
ATAGGGGCTA TTCCAGACTA CGATAGTATA GAAAAATAA 

 

Protein sequence

MEENTISLQE IAYALKKRWK LIALITIAAT LVSAILSFFV IKPQYEAKTK LFIGKQETSQ 
NAANYDNNDI MMYQKLMKTY AELAKTSDLV TKAVKNAKLD YNQNEIKGVL NNLNVTPSAD 
TQILDLSFKG KNPKEVLKVT EAITDEFISE SKELIPNGNV QVIQKPQLPE NPVSPNKKLN 
ILIAFVLGLM IGVGIVLLLE YLDNTFKSRE ELEKTLDLPI IGAIPDYDSI EK