Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0450 |
Symbol | |
ID | 4204200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 537134 |
End bp | 538171 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642565007 |
Product | hypothetical protein |
Protein accession | YP_697779 |
Protein GI | 110801565 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.376108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAA GTATAAAGAA GAATTTAAAA CCTAAGATTC TTATAAGTAA TTTAATATTG ATAATTGGTA TAGTTATTTT TGTTACTTTA TATGGAGCTG CGTTTGGAGG TAATAATAGT CTTATAGGAG TATGTGCCAT AACTGCAATG CTTATGTTTG TAGATGTTCA TTTAAGTTTA AAATTAAATG AGGCTATTAT AACTACAGTG TTATCCTTTG TTCTTATGGG AGTTTCAAGT CAAATAGCTT CAATAAACCC ATTTTTAGGA TTTGTAATAA ATTTCATAAG TATATTTGTA GTTTCATATT TGGTTACTAA TGTTACAGAA ACAAAAGCAT ATTTACCTTT TATACTTTGT TATGTATTTG TAGAAGGAAC TCCTATTACA TGGAGTGAAT TGCCAAGAAG ACTTATAGCA TTATTTGTTG GAGGAGCATT AATATCTTTA GTTTATTATT TTAGTCATAG AAAAAAAGAT GACTCTGATC ATATGAATAT AAGTGAAATG ATAAAAGCTA TGAATAAAGA TACCCTTCAA TTTAACTTTT CACTGAGAAT GGCACTTGCT GTATCCATAG CCATGTTACT TGGAAGCATA TTTGGTTTTC AAAAATCAAT GTGGATAAGT ATTACTGCAA TGTCAATAAC TCAACCACAC TTTGATGATA CTAAAACTAG GGTTAAGGAA AGATTCTTTG GTACTTTGAT AGGTGCAGCA ATATTTGTAT TAATATTTGT TTATCTTGTA CCACAACAGT TTAGTAGTAT AGTTTTACTT ATCCTAAGTT ATATTTACAC ATTCATCAAA GAATATAAAA TAAAGATGAT ATTCATAACC ATGAGTTCTT TAGGAGCTGC AATGATTTTA TTCCAACCAG GAGTTTCAAT ACCTATGAGA ATAGCTTTTA TAGTAGTTGG GATAGTTATA GCTTTAGTAG TAAATAAAGT TATTTATGGA AGATTAAAAT TAGAGAAAAG CAATGAAGAA TTAGATGAGA CTATTAAAGA TATAGATAAA GTAAATGATG AATTTTAG
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Protein sequence | MIESIKKNLK PKILISNLIL IIGIVIFVTL YGAAFGGNNS LIGVCAITAM LMFVDVHLSL KLNEAIITTV LSFVLMGVSS QIASINPFLG FVINFISIFV VSYLVTNVTE TKAYLPFILC YVFVEGTPIT WSELPRRLIA LFVGGALISL VYYFSHRKKD DSDHMNISEM IKAMNKDTLQ FNFSLRMALA VSIAMLLGSI FGFQKSMWIS ITAMSITQPH FDDTKTRVKE RFFGTLIGAA IFVLIFVYLV PQQFSSIVLL ILSYIYTFIK EYKIKMIFIT MSSLGAAMIL FQPGVSIPMR IAFIVVGIVI ALVVNKVIYG RLKLEKSNEE LDETIKDIDK VNDEF
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