Gene CPR_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0448 
Symbol 
ID4206222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp533921 
End bp534625 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content30% 
IMG OID642565005 
ProductDNA-binding response regulator 
Protein accessionYP_697777 
Protein GI110803699 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.223302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGT ATAATGTTTT AGTTGTTGAA GACGAAAAGG AAATAGCAGA GGCTATTGAA 
ATATATCTAA AAAATCAAGG ATACAATGTA TTTAAAGGAA GCAATGGTTT AGAAGGATTA
GAAATAGTTG AAAAGGAAGA GATTCATCTA GCTGTTGTTG ACATAATGAT GCCTAAAATG
GATGGAGCAA CAATGGTAAT GAAAATTAGA GAAAGATATG ACTTTCCTAT AATAATGTTA
TCAGCAAAAT CAGAGGACAT GGATAAAATT TTAGGACTAA ATATTGGAGC CGATGATTAT
GTAACAAAAC CATTTAATCC ACTAGAGCTT CTTGCAAGAG TTAATTCTCA ATTAAGAAGA
TATTCTAAAT ACTTAAGCAT GGTGAAAAAG GATGAGAAGA AAACAAATTC TTATGCCATA
GGTGGATTAG AAGTTAATAG TGATAGAAAA GAAGTAATAT TAGATGGAGA TGTAGTAAAA
GTAACTCCTA TAGAATTTAA AATACTTCAA TTACTTATTA AAAGTCCAGG AAGAGTTTTT
TCAGCAGAAG AAATATATGA AAGAGTATGG AATGAAAATG CAGTAAACAC AGACACTGTA
ATGGTCCATG TAAGAAATAT AAGAGAAAAA ATAGAGATAG ATCCAAAAAA TCCAAAATAT
TTAAAGGTGG TGTGGGGAGT TGGCTATAAA ATCGAAAAGC AATAA
 
Protein sequence
MEKYNVLVVE DEKEIAEAIE IYLKNQGYNV FKGSNGLEGL EIVEKEEIHL AVVDIMMPKM 
DGATMVMKIR ERYDFPIIML SAKSEDMDKI LGLNIGADDY VTKPFNPLEL LARVNSQLRR
YSKYLSMVKK DEKKTNSYAI GGLEVNSDRK EVILDGDVVK VTPIEFKILQ LLIKSPGRVF
SAEEIYERVW NENAVNTDTV MVHVRNIREK IEIDPKNPKY LKVVWGVGYK IEKQ