Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0445 |
Symbol | |
ID | 4206073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 530074 |
End bp | 530859 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 642565002 |
Product | MerR family transcriptional regulator |
Protein accession | YP_697774 |
Protein GI | 110803862 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0194713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAT ATTTTTCAAT TGGTGAAGTT TCAAAAATTA CTGGTTTATC CATAGATAGA CTAAGAAACT ATGACAAAAT AGGATTATTA AAACCTTCTT ATATTGATCC TAAAAGTGGA TATAGATATT ATTCAGAAAA TAAATTTAGA AAATTAAGAA TCATAAAATA TCTTAGAAAA ATTGGTACTC CCTTAAAAGA AATTGATTTA ATACTAAATA AAAATATAGA TTCTCAGGAA TTTGCGAAGT TTCTTGAACT TAAAATAAGG GATATTGAAA AGGAAATTGA AAGTTTAAAT ATGATAAAAG AAGATATAAG TGAAATTAAA CATACCTTTG AATGTAACTT TAAATTAAGC AATATAAATT ATATTCATAA AAAGTATATT GATGAAAGAT ATGTAGTAAA GAAAAGCCTA AATAAAAATA TAACTTTTGT TGTTTCCCAT AGAGAACAAG TATTTTCAAA GTTTAAATCA GAAATAAATA CTTTAGAACC TCCTCGTTCT CTAGAAAAAG GGCTCTATTT ACATAGCTTA GAAGACCTAG AAAATAATAA TACAGAGGTG TATATGCTTC TAAAAGATTA TGAAAATATA CATAATTTCA TTATACCTAG TGGTAACTAT TTATGCCTTT CATATAAAGA AAATGAACGT GATAAAGCTA TTTTTAAATT AAAATCCTAT ATTGAAGAAA ATCATATTAA AATTAAGGGA CCAATTTTAA ATTTAGTACT AACAACACTT CCAAAGGAAG AATTTCAATT TCAAATTCTA ATTTAA
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Protein sequence | MDKYFSIGEV SKITGLSIDR LRNYDKIGLL KPSYIDPKSG YRYYSENKFR KLRIIKYLRK IGTPLKEIDL ILNKNIDSQE FAKFLELKIR DIEKEIESLN MIKEDISEIK HTFECNFKLS NINYIHKKYI DERYVVKKSL NKNITFVVSH REQVFSKFKS EINTLEPPRS LEKGLYLHSL EDLENNNTEV YMLLKDYENI HNFIIPSGNY LCLSYKENER DKAIFKLKSY IEENHIKIKG PILNLVLTTL PKEEFQFQIL I
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