Gene CPR_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0445 
Symbol 
ID4206073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp530074 
End bp530859 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content23% 
IMG OID642565002 
ProductMerR family transcriptional regulator 
Protein accessionYP_697774 
Protein GI110803862 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0194713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT ATTTTTCAAT TGGTGAAGTT TCAAAAATTA CTGGTTTATC CATAGATAGA 
CTAAGAAACT ATGACAAAAT AGGATTATTA AAACCTTCTT ATATTGATCC TAAAAGTGGA
TATAGATATT ATTCAGAAAA TAAATTTAGA AAATTAAGAA TCATAAAATA TCTTAGAAAA
ATTGGTACTC CCTTAAAAGA AATTGATTTA ATACTAAATA AAAATATAGA TTCTCAGGAA
TTTGCGAAGT TTCTTGAACT TAAAATAAGG GATATTGAAA AGGAAATTGA AAGTTTAAAT
ATGATAAAAG AAGATATAAG TGAAATTAAA CATACCTTTG AATGTAACTT TAAATTAAGC
AATATAAATT ATATTCATAA AAAGTATATT GATGAAAGAT ATGTAGTAAA GAAAAGCCTA
AATAAAAATA TAACTTTTGT TGTTTCCCAT AGAGAACAAG TATTTTCAAA GTTTAAATCA
GAAATAAATA CTTTAGAACC TCCTCGTTCT CTAGAAAAAG GGCTCTATTT ACATAGCTTA
GAAGACCTAG AAAATAATAA TACAGAGGTG TATATGCTTC TAAAAGATTA TGAAAATATA
CATAATTTCA TTATACCTAG TGGTAACTAT TTATGCCTTT CATATAAAGA AAATGAACGT
GATAAAGCTA TTTTTAAATT AAAATCCTAT ATTGAAGAAA ATCATATTAA AATTAAGGGA
CCAATTTTAA ATTTAGTACT AACAACACTT CCAAAGGAAG AATTTCAATT TCAAATTCTA
ATTTAA
 
Protein sequence
MDKYFSIGEV SKITGLSIDR LRNYDKIGLL KPSYIDPKSG YRYYSENKFR KLRIIKYLRK 
IGTPLKEIDL ILNKNIDSQE FAKFLELKIR DIEKEIESLN MIKEDISEIK HTFECNFKLS
NINYIHKKYI DERYVVKKSL NKNITFVVSH REQVFSKFKS EINTLEPPRS LEKGLYLHSL
EDLENNNTEV YMLLKDYENI HNFIIPSGNY LCLSYKENER DKAIFKLKSY IEENHIKIKG
PILNLVLTTL PKEEFQFQIL I