Gene CPR_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0439 
Symbol 
ID4204925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp525336 
End bp526025 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content20% 
IMG OID642564996 
Producthypothetical protein 
Protein accessionYP_697768 
Protein GI110802885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0760948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAACT TAATAATTAA AGATTTAAAA GGAGCGAAAT GGACATTAAT AGCTTACTCT 
ATTTTATTAT GTTTTATATA TCTTCCTTTA CTTAATAAGA ATGCACCTAT AGTTAAAGAT 
TATAAAGAGA ACGTTTTTGA CTTTTTCACC AATTTAAATT TATTTTATTT TAGTAGTCTA 
TTTTTAATGA TAGCAATTAA CTTCATAATA ATAAGAAATA CAAATAAAAA ATCAAATACA 
AATAAACTTT TACGTTCTTT GCCTATAATG ACCAAAAGTA TAATAGGAAG TGTATTTATA 
GAACCCATAT TATTATTTTT AATATTTATA TTAGTTGGAT TAGGAATTAA TACTATATTT 
AGTTTATTTA TAGGAACACA TACAAAAATA AGTTTAGGAA TTTTAATTAT AATATTTATT 
ATGTTTTATA TTTATGCTTC AACAATGCTT GCTTTAGCAT TAGTTTATCC TGAAAGCAGC 
GTGGTTTCTT ATTTAAGAAG TGTGCCAATG TTTTTATTAA TAATAATAGT AGCTTTATTT 
GATAGGTTAA TAAAAAATTT AAATATAAAT ATAGATATTT TTGATAGATA TATTCCTTTA 
GCAATAGGAA TATTATTTAT AATTGGAATT TTAATAACAA TCTTTATGTA TAAATTCTCA 
ATAAATAAAT TTCTTGCAAA AGATTTATAG
 
Protein sequence
MKNLIIKDLK GAKWTLIAYS ILLCFIYLPL LNKNAPIVKD YKENVFDFFT NLNLFYFSSL 
FLMIAINFII IRNTNKKSNT NKLLRSLPIM TKSIIGSVFI EPILLFLIFI LVGLGINTIF 
SLFIGTHTKI SLGILIIIFI MFYIYASTML ALALVYPESS VVSYLRSVPM FLLIIIVALF 
DRLIKNLNIN IDIFDRYIPL AIGILFIIGI LITIFMYKFS INKFLAKDL