| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0423 |
|---|
| Symbol | |
|---|
| ID | 4204866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 511510 |
|---|
| End bp | 512793 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642564980 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_697752 |
|---|
| Protein GI | 110801915 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3538] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAT CAACTAACGA ATTAAAAGAG ATTGTAAGAA AAATTGGTAA AGATTTATCA
GCTAAAATAG AGGACAAGAA GTTACAAGAA TTATTTTATA ATTGCTTTAT AAATACAATG
GATACAACTG TAGAGGTTTC AGAGGGAGAT GCTTTTGTAA TTACTGGTGA TATTCCTGCA
ATGTGGCTTA GAGATTCCAC TTCTCAAGTA GAGCATTACT TACCATTTGT TAAGGAATAT
CCAGAATTAA AGGCTATTTT TACTGGGTTA ATAAATAGAC AAGTAAAATG TATATTCATA
GATCCATATG CAAATGCCTT TAATAAAGAG CCTAATGGAC AAAAATGGGA CAATGATATA
ACTAAGGATA GTCCTTGGGT TTGGGAAAGA AAGTATGAAA TAGATTCACT ATGTTATCCA
GTTAGATTAA TACATAAGTA TTGGAAAGAA TCTGGTGATG AAACTTTCTT TAATGATGAT
ATTAAAAAAG CTTTCAATAT GATAATAGAT CTTTGGAGAG TGGAGCAGTA TCATAGAGAA
AAATCAGATT ATAGCTTCCA AAGATTAAAT TGTTCAGTAA CTGACACTTT AAGCCATGAA
GGATTAGGAA CTCCAGTTAC TTACACAGGA ATGACATGGT CAGGATTTAG ACCAAGTGAT
GATGCTTGTG AATATGGATA CTTAATTCCA GCAAACATGT TCGCTGTAGT TGCCTTAAGA
TATATTTCAG AAATTGCAGA GAAGGTTTAT AAGGATGAAG AGCTTAAGGA AAAAGCTGAT
GGTTTAAGAG AAGAAATAGA TAATGCTATA GAAAAACATG GAAAAGTTTA TAAAGAAGGA
TTTGGAGAAG TTTATGCATA TGAAACTGAT GGTATGGGCA ACTATAACTT CATGGATGAT
GCTAATGTAC CAAGCCTTTT ATCAATACCT TACTTAGAGT ACAAAGGAAT TGAAGATGAA
GTTTACCAAA ATACTAGAAA GTTTATATTA AGTAAAAACA ATAGATTCTT TTTTGAAGGA
AAAGCTGCTA AAGGAATTGG AAGTCCACAT ACTCCAGATC AGTATATTTG GCACATAGCT
TTATCAATTC AAGGGTTAAC AACAAATAAT CAAGAGGAAA TAGAAGAATT AATTAAATTA
TTAAAAGAAA CTGATGCAGG AACTGGATAT ATGCATGAAG GTTTCCATGT AGATGACCCT
ACTAAGTTTA CAAGAGATTG GTTTGCATGG TCAAACTCAT TATTCTCACA CTTTATCTAT
GAGAAAGTTA TAAATAAAAA ATAA
|
|---|
| Protein sequence | MSLSTNELKE IVRKIGKDLS AKIEDKKLQE LFYNCFINTM DTTVEVSEGD AFVITGDIPA
MWLRDSTSQV EHYLPFVKEY PELKAIFTGL INRQVKCIFI DPYANAFNKE PNGQKWDNDI
TKDSPWVWER KYEIDSLCYP VRLIHKYWKE SGDETFFNDD IKKAFNMIID LWRVEQYHRE
KSDYSFQRLN CSVTDTLSHE GLGTPVTYTG MTWSGFRPSD DACEYGYLIP ANMFAVVALR
YISEIAEKVY KDEELKEKAD GLREEIDNAI EKHGKVYKEG FGEVYAYETD GMGNYNFMDD
ANVPSLLSIP YLEYKGIEDE VYQNTRKFIL SKNNRFFFEG KAAKGIGSPH TPDQYIWHIA
LSIQGLTTNN QEEIEELIKL LKETDAGTGY MHEGFHVDDP TKFTRDWFAW SNSLFSHFIY
EKVINKK
|
|---|
| |