| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0420 |
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| Symbol | glpQ |
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| ID | 4206456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 506819 |
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| End bp | 507562 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642564977 |
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| Product | glycerophosphoryl diester phosphodiesterase |
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| Protein accession | YP_697749 |
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| Protein GI | 110801784 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA TATTAAACGT AGCACACAGA GGATTAAGTG GATTGTATCC AGAAAATACT
ATGATAGCTT TTAGAAAGGC AATAGAAGTA GATTGTGATG GTATAGAAAT GGATGTTCAT
CTTACAAAGG ATGGAGTTCC AGTTGTAATT CATGATGAAG AAGTTGATAG AACAACTAAT
GGAAGTGGGT ATGTAAAGGA CTTGACTTAT GAACAATTAT GTAACTTAGA TGCTGGAATA
AAATTTTCTG ATGAATTTAA GGGAGAAAAA ATACCTACAT TAAAAGAGTT TTTTGATTTT
ATGAAGGATA ATGACAAACT TATAAATATA GAGCTTAAAA ATAGCATCAT ACATTATGAA
GGTTTAGAAG AAAAGGTATA TAAAGAAATA GAGAATTATG GATTTGAGGA TAGGGTTATA
ATATCATCCT TTGATCATTA TTCAATAAGA AAATGTATAA GACTTAATAA AAATATAAAA
ACAGGAATAC TTTATTGTGA TTGTATTTTT GAACCACATA ATTATTGTAA GGTAGTTGGG
TCTTCAGCAC TTCATCCTGA ATTTAATAGT ATAACAGAAG AAATAGTTAA GGCTGCCCAT
GAAGATTTTC AACAAATAAA TGTGTACACA GTAAATGAGA AAAAAGATAT GGAAAAAATG
ATAGATTTAA AAGTTGATAT GATAATAACT AATTATCCTA ATATTTTAAA AGAAGTTTTA
GAAAATAAAT ATAATAAGGT TTAA
|
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| Protein sequence | MKKILNVAHR GLSGLYPENT MIAFRKAIEV DCDGIEMDVH LTKDGVPVVI HDEEVDRTTN
GSGYVKDLTY EQLCNLDAGI KFSDEFKGEK IPTLKEFFDF MKDNDKLINI ELKNSIIHYE
GLEEKVYKEI ENYGFEDRVI ISSFDHYSIR KCIRLNKNIK TGILYCDCIF EPHNYCKVVG
SSALHPEFNS ITEEIVKAAH EDFQQINVYT VNEKKDMEKM IDLKVDMIIT NYPNILKEVL
ENKYNKV
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