Gene CPR_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0407 
Symbol 
ID4205566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp492792 
End bp493286 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content29% 
IMG OID642564964 
ProductISCpe2, transposase orfB 
Protein accessionYP_697736 
Protein GI110802802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAAGAA AGAAAGCATA TAAATTTAGA ATATATCCAA CTAAGAAACA AGCCGAGCTA 
ATTAACAAGA CTATTGGATG TTGTAGGTTT GTATTCAACT ATTCTTTAGG TGTTCAAAAA
ACTAAAGATA ATTATTGGAA TATAGTTGAG GAGATGGTTC AACAAGGCTA CTTCCAAGAG
AATAATTGGA AAGGCGAGTT CTTTAATAAA GCCAATTCAA TTAAAGATAT AGCTAAATTA
AAGAAAAGCT ATGATTGGCT TAAAGAAGTA GATAGCATAG CACTACAGGC TTCTGTTGAA
AATCTTGGTG CTGGATATGA TAAGTATTAC AAAAAAACAG GTGGCAGACC TAAATTTAAG
TCTAAGAAAA ATGAAATACA ATCTTATACT ACTAAATTGG TAAAAGCTAA AGGTAATGTA
AATATTGAGA TAGTAGGTAA AAGAATTAAA CTACCTAAAC TTGGATTAGT TAAGATAGAA
AATTCAGAAA TGTAG
 
Protein sequence
MIRKKAYKFR IYPTKKQAEL INKTIGCCRF VFNYSLGVQK TKDNYWNIVE EMVQQGYFQE 
NNWKGEFFNK ANSIKDIAKL KKSYDWLKEV DSIALQASVE NLGAGYDKYY KKTGGRPKFK
SKKNEIQSYT TKLVKAKGNV NIEIVGKRIK LPKLGLVKIE NSEM