Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0371 |
Symbol | deoB |
ID | 4204174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 453718 |
End bp | 454908 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642564928 |
Product | phosphopentomutase |
Protein accession | YP_697700 |
Protein GI | 110803531 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAT ACAAAAGAAT TTTCACAATA GTAATAGATT CATTAGGAAT AGGTGCAATG AATGATTCAG AAAAATATGG AGATGTTAAT GTTGATACAT TAGGACACAT TGCTGAATCA GTAGACACAT TTAATATACC TAATCTTCAA AAAATGGGTA TAGCAAACTT ACACCCAATA AAACACGTAG CTCCAGTTGA GAATCCAATA GGATACCAAG CTAAAATGGC TGAAGCAAGT GTTGGTAAAG ATACAATGAC AGGACACTGG GAAATGATGG GCTTACACAT AACTAAGCCA TTTAAAACTT TCACAGATAC TGGATTCCCA CAAGAATTAT TAGATGAGTT AACAGCAAGA ACTGGTCATA AAATAGTAGG AAACAAGAGT GCTAGTGGAA CAGAAATCCT AGATGAATTA GGAGAACATC AAATTGCAAC TGGAGATATG ATAGTTTATA CATCAGCAGA TTCAGTTTTA CAAATTTGTG GTCAAGAAGA AACTTTCGGC TTAGAAGAAT TATATAGATG TTGTGAAATC GCAAGAGAAT TAACTCTTAA AGATGAATGG AAAGTTGGAA GAATCATAGC AAGACCTTAC TTAGGAACTA AAAAAGGTGA ATTCAAAAGA ACAAGCAATA GACATGACTA TGCTCTTAAA CCATATGGAA GAACAGTTCT TAATGAATTA AAAGACAACA ACTTTGATGT TATTTCAGTT GGTAAAATAA AAGATATATT TGATGGAGAA GGAATAACAG AAGGAAATAA ATCTAAGAGT TCAGTTCATG GTATGGAACA AACATTAGAA ATAATGGATA GAGACTTTAC TGGATTCTGC TTTATTAACT TAGTTGACTT TGATGCTTTA TGGGGACATA GAAGAAATCC ACAAGGTTAT GCAGAAGAAT TAGAAAAATT CGACGTTAAC TTAGGAAAAG TATTAGAAAA ATTACATGAA GATGATTTAT TAATAATAAC AGCTGACCAT GGTAATGACC CAACATACAC AGGAACAGAC CACACTCGTG AGTATGTACC ATTCTTAGCT TATTCACCAT CAATGAAAGG TCATGGACAA TTAGAAACTC CAAAAACATT TGCAACTATT GGAGCAACAA TTGCTGATAA CTTTGGATTA AAAATGCCAG AAGGAACAAT TGGTGAATCA GTTCTAAATA AATTAGTTTA A
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Protein sequence | MSKYKRIFTI VIDSLGIGAM NDSEKYGDVN VDTLGHIAES VDTFNIPNLQ KMGIANLHPI KHVAPVENPI GYQAKMAEAS VGKDTMTGHW EMMGLHITKP FKTFTDTGFP QELLDELTAR TGHKIVGNKS ASGTEILDEL GEHQIATGDM IVYTSADSVL QICGQEETFG LEELYRCCEI ARELTLKDEW KVGRIIARPY LGTKKGEFKR TSNRHDYALK PYGRTVLNEL KDNNFDVISV GKIKDIFDGE GITEGNKSKS SVHGMEQTLE IMDRDFTGFC FINLVDFDAL WGHRRNPQGY AEELEKFDVN LGKVLEKLHE DDLLIITADH GNDPTYTGTD HTREYVPFLA YSPSMKGHGQ LETPKTFATI GATIADNFGL KMPEGTIGES VLNKLV
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