| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0370 |
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| Symbol | udp |
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| ID | 4206561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 451473 |
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| End bp | 452258 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642564927 |
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| Product | uridine phosphorylase |
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| Protein accession | YP_697699 |
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| Protein GI | 110801850 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD)
[TIGR01718] uridine phosphorylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTATA CACAAGGTTC AGACAAACAA TTTCATATAG ACGTAGCACC AGGAGAAGTT
GGAAAATATG TAATAATGCC TGGAGATCCA AAAAGATGTG CTAAAATAGC AAAATACTTA
GACAATGCTA AGTTAATAGC AGATAAAAGA GAATATGTTA CATATACTGG ATATTTAGAT
GGAGAAAAAG TAAGCGTTAC CTCAACTGGA ATTGGTGGCC CATCAGCTGC AATAGCATTA
GAAGAATTAG TTAAATGTGG AGCAGACACT TTCATCAGAG TAGGGACTTG TGGAGGAATA
GATTTAAACG TTAAAGGTGG AGATCTTATA ATAGCAACTG GATCTATAAG AGCAGAAGGT
ACTTCAAGAG AATATGCTCC AATAGAATTC CCAGCAGTAG CAAACTTAGA TGTAATAAAT
GCTTTAGTTA AAGGAGCAAA AGAATTAAAA GTTCCTTACC ATACTGGTGT GGTTCAATCA
AAGGACTCTT TTTATGGACA ACACTCACCA GAAACTAAAC CTGTAAGCTA TGACTTATTA
AACAAATGGG AAGCATGGAA AAGATGTGGA TGTTTAGGAT CAGAAATGGA AGGTGCAGCA
TTATTTATAG TAGGAAGCTA TTTAAGAGTA AGAGTTGGAG CTGTTTTCCT AACTATAGCT
AACCAAGAAA GACAAAAAGA AGGACTTGAT AATCCTCAAG TACATGATAC AGAACTTGCA
ATAAAAGCGG GAATAGAAGG AATAAGAAAC TTAATTAAAG AAGATAAAAT GAAAAATAAT
GCATAG
|
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| Protein sequence | MIYTQGSDKQ FHIDVAPGEV GKYVIMPGDP KRCAKIAKYL DNAKLIADKR EYVTYTGYLD
GEKVSVTSTG IGGPSAAIAL EELVKCGADT FIRVGTCGGI DLNVKGGDLI IATGSIRAEG
TSREYAPIEF PAVANLDVIN ALVKGAKELK VPYHTGVVQS KDSFYGQHSP ETKPVSYDLL
NKWEAWKRCG CLGSEMEGAA LFIVGSYLRV RVGAVFLTIA NQERQKEGLD NPQVHDTELA
IKAGIEGIRN LIKEDKMKNN A
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