| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0350 |
|---|
| Symbol | |
|---|
| ID | 4205367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 424236 |
|---|
| End bp | 425420 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 22% |
|---|
| IMG OID | 642564907 |
|---|
| Product | DNA helicase II related protein, putative |
|---|
| Protein accession | YP_697679 |
|---|
| Protein GI | 110802819 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00193946 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGAA AGAAATTTGA TTGGAGTAAA TTTGAGATAA ATCATTTTCA TTTTTTCATA
AATCAAAAGA TAAATCAATA TGGAGGAACA ATAGCTCATG TTGATTATGG AGAAGATAAT
TATTATGAAG AAGACAAATA TTATGAAACA ATTATAGAAC AGCTAGAAGT TATTAAAGAA
AAAATAAAGA AATATAATGC AATTTTTATA GATGAAGGCC AAGATTATGA TAAAAGATGG
TTTGATATAA TTGAAAAATA TTTTTTAGCT AATAATGGAG AATTTGTTAT TTTTGCTGAT
GAGAAGCAAA ATATATATAA TAGGGTTGAA TTAGATGAAG ATAAAAGAAT TAAAACTAAT
ATACGAGGAA GATGGAATGA ATTAAATAAA ACATTTAGAA TTGGAATAGA ATTTTCAAGA
TTAGCTGGTG AATTTCAAAA AGAATTTTTA AAAGATAGAT ATAATTTAGA TGATATCAAA
GTGCCAGATG AAGAAGAAAT TAATATGTTT GATCAGATAG ACAAGAATTT AAGTGATAAT
TTAAATCAAG ATTCAATATT TAATTATTTA AATATAATTG ATTATAAAGA TATATTTAAG
GATATTGAAG AATACGTTAG AAAAAAGAAT ATAGAGTATG GTGAAATTTG TATATTAGGT
GAAAATATAG ATAATTTAAG AGCATTAGAA AAGGAAGTAA GGGATAGTTA TAATATAGAG
AGTGAAATTA CATTTGAAAC AGAGGAAGAG TATAAAAGTA TAAAATGTTC AGTAGATGAA
ATTATTCAAT ATGATACTTT AAATTGTGTT TTTAAAAATA ATAATTATTA TAGTAAACTA
CTTAAATCAA GACTTGATGA AGTAAGAAGA AATAAAAAAT ATTCTTTTAA AGTTGTGAGT
GAAAATTTAA AAATAAGTAC TATTCACAGC TTTAAAGGAT GGGAAATTGA TACGCTTGTA
TTAATTTTAG ATGAAAATAC TGATGAAAAT GTAAATGAAG AATTAATATA TACAGCAATT
ACAAGATGTA AGAAAAATTT AATTATATAT GGTTTAAGAA ATTCTAAATA TTATAAATTC
TTTTCTGAAA ATTTTAAACA GGTTAATGAT TTACAATTTA GCATGTATCC AGTATTACCT
GAATTTGAAT TCAGTATGTC TAAGAATAAT GAGCTGATTT GGTAA
|
|---|
| Protein sequence | MVRKKFDWSK FEINHFHFFI NQKINQYGGT IAHVDYGEDN YYEEDKYYET IIEQLEVIKE
KIKKYNAIFI DEGQDYDKRW FDIIEKYFLA NNGEFVIFAD EKQNIYNRVE LDEDKRIKTN
IRGRWNELNK TFRIGIEFSR LAGEFQKEFL KDRYNLDDIK VPDEEEINMF DQIDKNLSDN
LNQDSIFNYL NIIDYKDIFK DIEEYVRKKN IEYGEICILG ENIDNLRALE KEVRDSYNIE
SEITFETEEE YKSIKCSVDE IIQYDTLNCV FKNNNYYSKL LKSRLDEVRR NKKYSFKVVS
ENLKISTIHS FKGWEIDTLV LILDENTDEN VNEELIYTAI TRCKKNLIIY GLRNSKYYKF
FSENFKQVND LQFSMYPVLP EFEFSMSKNN ELIW
|
|---|
| |