| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0328 |
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| Symbol | recQ |
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| ID | 4204163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 391776 |
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| End bp | 393941 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642564885 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_697657 |
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| Protein GI | 110803521 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATAGAG CGAAAGAAAT TTTAAAAAGT TTTTATGGAT ATAGTGAGTT TAGAAAAGGA
CAAGAGGAAA TAATAAATGA GATTATAAGT GGAAATGATG TTGTAGCTAT AATGCCAACT
GGTGGAGGAA AATCAATTTG TTATCAAATT CCTGCATTGA TTTTAGAGGG GGTTACAGTT
GTAATTTCAC CACTTATTTC TCTTATGAAA GACCAAGTTG ATGCCATAAA TAGCATGGGA
ATAGAGTCAG CATATATAAA TTCTACTCTT AGTAATGAAG AGATAAATAA TATATTTCAA
AGTGTTAAAG ATGGACATAT AAAAATATTA TATGTGGCAC CTGAAAGACT TGAATCTATG
GAATTTTTAA ATTTAGTTTC TAATATAGAT ATTTCACAGG TGGCTGTTGA TGAGGCACAT
TGTGTTTCTC AATGGGGACA TGATTTTAGA AGTAGTTATA AGTTTATTGG AAGGTTTATA
AATATTTTAA GAAAAAGACC TGTAGTTTCA GCCTTTACAG CAACTGCAAC AGAGGAAGTT
AGAAAAGATA TTGTAAAATT ACTTGAGCTT AATAATCCAA AGGTTTTTGT TTCTGGATTT
GATAGGGATA ATTTAAAAAT AATAATAGAA AAGGGAGTTA ACAAGGCTCA CTATATATTA
GATTATTTAA AAGAAAATAA GGATGTTTCT GGAATTATTT ATTGTTCTAC CAGAAGAGAG
GTAGATTCCT TATGTGAGCT TATAAATTCA AGAGGAATAG GATGCACAAA ATATCATGCT
GGACTTTCAG ATGAGGAAAG AAAGAAAAAT CAAGAGGATT TTGTTTTCGA TAAGGTAAGT
GTAATGGTTG CTACTAATGC CTTTGGAATG GGTATAGATA AGCCAAATAT AAGATATGTA
ATTCACAATA ATATGCCTAA AAACATAGAG GGATATTATC AGGAAATAGG AAGAGCGGGA
AGAGATGGAG AGAAATCAGA GTGTATCCTT ATCTTTTCAC CAGGAGATGT TCAGACACAG
AAATATATAA TAGAAACTGG AACCTTAAAT CCTGAAAGAA AGATAAATGA ATTAAGTAAG
TTACAAACAA TGATGGATTT AGTTTATTGT AATGGATGTT ATAGAAGATT TATACTTAAT
TATTTTGGAG AAGACTTAGA GGAAGACTGT CATAATTGTA GCAATTGTGA AATGGAAGGG
GAATTAGTTG ATAAAACAAT AGATGCTCAA AAAGTTATTT CCTGTGTTTA TAGGATGAAA
AGACCCTTTG GAATAGGAGT AATAATAGAT GTTTTAAGAG CCTCAAAAAA TAAAAAGATA
ATTGAATTAG GGTTAGATCA GCTAAGTACT TATGGAATAA TGAAGGATTA TTCTAAAGAA
GGGCTTAAGG ACTTTATAAA CACTCTAATT TCGCATAGAT ATATAGATTA TATAGGGGAG
TACCCTGTAG TTAGACTTAA TCAAAGTTCC ATAGATATTC TTAAGGGTAA TGAAAAAGTT
ATGTTTAAGG AAAAAATAAA AGCTAAGAGG GTATCTAAAA ATAATGAATT ATTTGATTTA
TTAAGAAGTT TAAGAAGAGA AATTGCTTCA GAAGAAGGGG TACCTCCATA TATAGTATTT
GGTGATAATA CACTTAAAGA GATGAGTGTA AGAATGCCAG TAAATGAGAG CCAGCTTTCA
GAAATAAGTG GTGTTGGTGA AAAGAAAATA CTTAAGTATG GAGAAATGTT CTTAAATGTA
ATAAATGAAT ATGTTAAGGT GAACAATATT GAGATTAAGT GGGAATCTGG ATTGAAAATT
AATAAGGATG AGCTAGAAAA AAAGTTTAAA AAAGGTAATG GTAAGGATGG GAAGAAAAAG
TCCTTTGAAA TTACTATAGA TATGCTTAGA GAAGGGAAAA AATTCCATAC TATTGTAAAG
GAAAGAGAAC TTTCTATTAC TACATTACTT TCTCATATTC AGCAATATTT AGAAGAGGGA
AATAAAATAG ACTTTGAAAT AGATTTTGAT TCCTTATTTT CAAAAAGGGA AGAAAAATTG
ATTTTAGATG CTATAGATAA GGTTGGGTAT AGTAAGTTAA AGCCTATTAA GGAAAATCTA
GAAGAAGATG TATCATATGA AAAAATAAGA TTTATAGTTA CTAAATTTAT TATAAACATG
ATTTAA
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| Protein sequence | MNRAKEILKS FYGYSEFRKG QEEIINEIIS GNDVVAIMPT GGGKSICYQI PALILEGVTV
VISPLISLMK DQVDAINSMG IESAYINSTL SNEEINNIFQ SVKDGHIKIL YVAPERLESM
EFLNLVSNID ISQVAVDEAH CVSQWGHDFR SSYKFIGRFI NILRKRPVVS AFTATATEEV
RKDIVKLLEL NNPKVFVSGF DRDNLKIIIE KGVNKAHYIL DYLKENKDVS GIIYCSTRRE
VDSLCELINS RGIGCTKYHA GLSDEERKKN QEDFVFDKVS VMVATNAFGM GIDKPNIRYV
IHNNMPKNIE GYYQEIGRAG RDGEKSECIL IFSPGDVQTQ KYIIETGTLN PERKINELSK
LQTMMDLVYC NGCYRRFILN YFGEDLEEDC HNCSNCEMEG ELVDKTIDAQ KVISCVYRMK
RPFGIGVIID VLRASKNKKI IELGLDQLST YGIMKDYSKE GLKDFINTLI SHRYIDYIGE
YPVVRLNQSS IDILKGNEKV MFKEKIKAKR VSKNNELFDL LRSLRREIAS EEGVPPYIVF
GDNTLKEMSV RMPVNESQLS EISGVGEKKI LKYGEMFLNV INEYVKVNNI EIKWESGLKI
NKDELEKKFK KGNGKDGKKK SFEITIDMLR EGKKFHTIVK ERELSITTLL SHIQQYLEEG
NKIDFEIDFD SLFSKREEKL ILDAIDKVGY SKLKPIKENL EEDVSYEKIR FIVTKFIINM
I
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