Gene CPR_0309 details

Gene Information

• Locus tag: CPR_0309
• ID: 4205444
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 368588
• End bp: 369262
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642564866
• Product: hypothetical protein
• Protein accession: YP_697638
• Protein GI: 110802179
• COG category: [S] Function unknown
• COG ID: [COG5523] Predicted integral membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTGATA GAGTAGAGTG TAAACTAAAA GCCAAAGAAT TATTAAGAGG AAGATGGGAA 
AATGCTGTAG GAGCATGTTT GTTATTTTTT GTTTCAACAT TTTTATTAAG TTTTTTATTA 
TCTCCAATAC CTGTATTCGG GTGGATTATA ATTGCACTAA TCTCAACATT TTTAACTGGA 
AGCTTTATAA AGTATTGTAT TAAGCTAAAT GAAACAGAGG GAAAAGTAAA ATACTTAGAA 
TGCTTAATAA GTTTCAAGAC TACTCTTAAA ATTTTAGCAT GTGATATTTT AATTGGATTA 
GTTGTAGGAA TAGGTTGGAT TATATTTACA ATGATATTTT CAGTTGCTTT TATAGCTAGT 
CAAAGCATCG TAGTAATTAT TGTAGTTCTT ATTATTTTAG TTGCTTTAGG ATTTTTTATA 
GAGGCAATAT TATTCCCTGT ACCTATGATA TTAACAGAAG ATGAGGGCGT TGGAGTAATG 
GAAGCTATAG AAATGAGCTT TAATATAACT AAGGGATATA GATGGAAGTA TATAGTTATG 
AACTTAAGCT TTATAGGATG GATGATATTA TCTTTCCTTA CTTTTGGAAT AGGTATGCTT 
TGGTTACAAC CATATATGAT GTTAACTTAT TATCTTTTCT ATAAAGGAAT AAGAAGTGCT 
AACACTACTA TTTAA 

 

Protein sequence

MTDRVECKLK AKELLRGRWE NAVGACLLFF VSTFLLSFLL SPIPVFGWII IALISTFLTG 
SFIKYCIKLN ETEGKVKYLE CLISFKTTLK ILACDILIGL VVGIGWIIFT MIFSVAFIAS 
QSIVVIIVVL IILVALGFFI EAILFPVPMI LTEDEGVGVM EAIEMSFNIT KGYRWKYIVM 
NLSFIGWMIL SFLTFGIGML WLQPYMMLTY YLFYKGIRSA NTTI