| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0305 |
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| Symbol | |
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| ID | 4204711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 365152 |
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| End bp | 366552 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642564862 |
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| Product | glycolate oxidase subunit-like protein ysfC |
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| Protein accession | YP_697634 |
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| Protein GI | 110802925 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATA ACAAAATAAA TGAAAGTGGA ATTGAATTTA TAAAAGGAAT AATAAATGAT
AATGAAAGAG TATTTATTGG AGAAGAAATA AGTGAAGACT ATTCTCATGA TGAGTTAGGT
TCAGAAAAGC ATATGCCTGA TATTGTTGTT AAGGCTATGA ATAGAGATGA AATTGTAGAA
ATAATGAAAT ATGCAAATAA TAACAATACT CCTGTAACTG TAAGAGGAGC TGGTACTGGA
CTTGTTGGAG CAGCAGTTCC AATACTAGGA GGAATTTTAT TAGATTTAAG TGGAATGAAT
AAAATATTAG AGTTAGATGA AGATAACTTA ACTCTTACAG TTGAACCTGG AGTTCTTATT
ATGGAAATAG CTAAATTTGT TGAGGAACAT GATTTATTTT ATCCACCAGA TCCAGGAGAA
AAAACAGCAA CCATAGGTGG TAATGTTAGT ACAAATGCAG GAGGAATGAG AGCTGTTAAA
TATGGAGTAA CAAGAGATTA TGTAAGAGGA ATGGAAGTAG TTCTTCCTAG TGGAGAAGTA
TTAGAACTTG GTGGAAAAGT TGTTAAAAAT AGTTCAGGAT ATAGCTTAAA AGATTTAATT
ATTGGATCAG AAGGAACATT AGGAATAATA ACAAAAATAG TATTAAAACT ATTACCACTT
CCAAAGAAGG TAATAAGCCT TTTAGTTCCA TTTAATGATT TAGAAAGTGC CATAGAAACA
GTTCCTAAAA TAATAAAATC AAAGAACATT CCAACAGCTA TAGAATTTAT GCAAAGAGAT
TTAATAATTT CAGCAGAGGA ATTTTTAGGA AAGAAATTTC CTGATAGCTC ATCAAATGCT
TATTTAATAT TAAGCTTTGA TGGAAACTCA AAGGAAGAGG TTGAAGGATA TTATGAAAAA
GTAGCTGACA TATGTTTAAA AGAAGGAGCT TTAGATGTAT TTATATCAGA TACAGAAGAA
AGACAAGAAT CAATATGGTC AGCTAGGGGA GCTTTCTTAG AAGCCATAAA GGCATCAACA
AGTGATTTAG ATGAGGTTGA TGTTGTTGTA CCAAGAAATA AGGTAGCAGA GTTTGTAAAA
TTCACTAATG AAGTAGAGGA AAAACTTAAT GTTAGAATAA GAAGTTTTGG ACATGCTGGT
GATGGAAACT TACACATTTA TATATTAAAA GATGAATTAT CAGAGGGTGA ATGGCATAAA
AAACTTAATG AAGCTATGGA AATACTCTAT AGAAAACAAA GAGAACTTAA TGGACAAGTC
TCTGGAGAAC ATGGAATAGG CTTAGCTAAG AGATTATATC TAAATGAATC CTTAAATAAG
GCCACAATGG ATATTATGAG AGGAATAAAA TTAGCCTTTG ATCCAAATAA TATTTTAAAT
CCAGGTAAGG TTTGTGAATA A
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| Protein sequence | MSYNKINESG IEFIKGIIND NERVFIGEEI SEDYSHDELG SEKHMPDIVV KAMNRDEIVE
IMKYANNNNT PVTVRGAGTG LVGAAVPILG GILLDLSGMN KILELDEDNL TLTVEPGVLI
MEIAKFVEEH DLFYPPDPGE KTATIGGNVS TNAGGMRAVK YGVTRDYVRG MEVVLPSGEV
LELGGKVVKN SSGYSLKDLI IGSEGTLGII TKIVLKLLPL PKKVISLLVP FNDLESAIET
VPKIIKSKNI PTAIEFMQRD LIISAEEFLG KKFPDSSSNA YLILSFDGNS KEEVEGYYEK
VADICLKEGA LDVFISDTEE RQESIWSARG AFLEAIKAST SDLDEVDVVV PRNKVAEFVK
FTNEVEEKLN VRIRSFGHAG DGNLHIYILK DELSEGEWHK KLNEAMEILY RKQRELNGQV
SGEHGIGLAK RLYLNESLNK ATMDIMRGIK LAFDPNNILN PGKVCE
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