Gene CPR_0295 details

Gene Information

• Locus tag: CPR_0295
• Symbol: uvrB
• ID: 4204433
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 352009
• End bp: 353988
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642564852
• Product: excinuclease ABC subunit B
• Protein accession: YP_697624
• Protein GI: 110802378
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.837943
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAGAAT TTAAAATACA ATCAAAATTT AAACCTACAG GGGATCAGCC TAAAGCAATA 
GATACTTTAG TTCAGTCTAT TGAAAATGGT AATAGAGGGC AAACTCTTTT AGGAGTTACA 
GGCTCAGGAA AAACATTCAC TATGGCAAAT ATCATAGAAA GAACTCAAAA ACCAACCCTT 
ATTTTAGCTC ATAATAAGAC ATTGGCAGCT CAACTTTGTG CTGAATTTAA GGAATTCTTT 
CCCGACAATA TAGTAGAGTA CTTTGTTTCA TATTATGATT ACTATCAACC AGAGGCTTAT 
GTACCTCAAA CAGATACTTT TATAGAGAAG GATGCATCTA TTAATGACGA GATTGATAAA 
CTTCGTCACT CAGCTACTTC TGCACTTTTA GAGAGAAGAG ATGTAATAAT AGTTGCTTCA 
GTTTCTTGTA TATATGGACT TGGTAATCCA GAAGAGTATA AAAAGCTTAC AATATCTTTA 
AGACCGGGTA TGATTAAGGA CAGGGATGAA GTTATTAAGA AGCTTATAGA AATACAATAT 
GAAAGAAATG ACATAGATTT TGCTAGAGGA ACTTTTAGAG TAAGAGGAGA TAATTTAGAT 
ATAATTCCTT CATCATCTTC TTCTAAGGGT ATTAGAATTG AATTCTTTGG AGATGAGATA 
GATAGAATAA GAGAGTTTGA TGTTCTTACA GGAAATATAA TTGGAGAAAG ACAACATGTT 
AGTATAACTC CAGCGTCTCA CTTTGCTGCC TCTGAGGAAA CCTTAGAAAA ATCAATAAGT 
ATAATAGAAG ATGAACTTGA AGATAGATTA AAAGTTCTTA CAGCTGAGGA TAAAATATTA 
GAGGCACAAA GGTTAAAGCA GAGAACAAAT TATGATATAG AAATGATTAG AGAAATGGGG 
TATTGCCAAG GAATAGAAAA TTATTCAAGA ATATTAGATG GAAGAATGCC GGGAACTCCA 
CCTCAAACTT TACTCGATTA TTTCCCAGAA GATTTCTTAA TGTTTATAGA TGAAAGCCAT 
GTTACACTAC CTCAAGTTAG GGCAATGTAT GCTGGAGATA GATCTAGAAA GACATCTTTA 
GTTGAGTTTG GATTTAGACT GCCTTGTGCA TTTGATAATA GACCTCTTAA ATTCAGTGAA 
TTTGAAAGCA AAATAAATCA AGTAGTCTTT GTAAGTGCTA CTCCAGGAGA GTATGAACTA 
GATCATTCTG AGATTGTAGC GGAACAAATA ATAAGACCTA CAGGGCTTTT AGATCCTGTA 
ATTGAAATAA GACCTATAAA GGGACAAATT GATGATCTTT ATGGTGAGAT TCAAAGAACT 
GTACAAAGAG GATTTAGAGT TCTTATAACA ACTCTTACAA AGAGAATGGC TGAGGATTTA 
ACTAAGTATT TAAAAGACTT AAATGTTAAA GCTACATACA TGCATTCAGA TATAGATACC 
TTAGAAAGAA TGAAGATAAT AAGAGAACTT AGACTTGGAG AGGTTGATGT ATTAATAGGT 
ATAAATCTCT TAAGGGAAGG TTTAGATATA CCTGAGGTAG CTTTAGTTGC AATATTAGAT 
GCTGATAAAG AAGGATTCTT AAGATCTGAA ACTTCATTAA TACAAACCAT AGGTAGAGCG 
GCTAGAAACT CAGAAAGTAA AGTAATAATG TATGCAGATA ATATTACAAA ATCTATGGAT 
AAGTCTATTA AGGAAACTGA AAGAAGAAGA GTTATTCAGA TGGAGTATAA TGAGGAACAT 
AATATTACTC CTACTACTGT AATAAAAGGA GTTAGGGATA TAATTGAAGC TACTAAGGTT 
TCAGAAGAAA AAGAAAATTA TGAAAGTGAA GTTAAAAAGG CAGCTAAGAA AGATATTCCT 
ATAGAAAAAC TTATAGAGCA ATATGAGGAA GAAATGAAGG AAGCGGCTAA AAATCTTCAA 
TTTGAAAGAG CTGCTGAACT TAGAGATATA ATAAAGGATT TAAAAGAAAA CTCTAAATAA 

 

Protein sequence

MGEFKIQSKF KPTGDQPKAI DTLVQSIENG NRGQTLLGVT GSGKTFTMAN IIERTQKPTL 
ILAHNKTLAA QLCAEFKEFF PDNIVEYFVS YYDYYQPEAY VPQTDTFIEK DASINDEIDK 
LRHSATSALL ERRDVIIVAS VSCIYGLGNP EEYKKLTISL RPGMIKDRDE VIKKLIEIQY 
ERNDIDFARG TFRVRGDNLD IIPSSSSSKG IRIEFFGDEI DRIREFDVLT GNIIGERQHV 
SITPASHFAA SEETLEKSIS IIEDELEDRL KVLTAEDKIL EAQRLKQRTN YDIEMIREMG 
YCQGIENYSR ILDGRMPGTP PQTLLDYFPE DFLMFIDESH VTLPQVRAMY AGDRSRKTSL 
VEFGFRLPCA FDNRPLKFSE FESKINQVVF VSATPGEYEL DHSEIVAEQI IRPTGLLDPV 
IEIRPIKGQI DDLYGEIQRT VQRGFRVLIT TLTKRMAEDL TKYLKDLNVK ATYMHSDIDT 
LERMKIIREL RLGEVDVLIG INLLREGLDI PEVALVAILD ADKEGFLRSE TSLIQTIGRA 
ARNSESKVIM YADNITKSMD KSIKETERRR VIQMEYNEEH NITPTTVIKG VRDIIEATKV 
SEEKENYESE VKKAAKKDIP IEKLIEQYEE EMKEAAKNLQ FERAAELRDI IKDLKENSK