Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0293 |
Symbol | |
ID | 4205234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 349332 |
End bp | 350618 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642564850 |
Product | carboxyl-terminal protease |
Protein accession | YP_697622 |
Protein GI | 110803034 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0636563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCACA ATAAGGATGA AAAAAATAAA TATAATAATA TTATTAAAAA TCTTAAGAAG AAAAAAGGAT TCAGAGCTTT AGCCATGGGT GTTGGTTTAA CTTTAATAAT TGGTGTTTCT GTATATGCAG GAAATAGACT AACTGCCTTT GGAATCTTGC CTATAACCAG TGTAAGTGCA GTTCAATCTT CCTTAGAGAA AGTAAATGAT ACAAAAAATT TTAAAAAGGT ATTAGAAGTA AGGGAAATGC TTTATAGATG GTATGATGGA GAAATTGATG ATAGCAAATT AGCTGAAGGT GCTATAAAGG GTATGGTTTC ATCTTTAGGT GATCAATACA CATATTATAT GAATGGAAAA GAATTTTCAG ATTTTAAAGA AAAAAGTCAA GGAAACTATA TGGGAATTGG GATTCAAGTA GCTGTTAAGG ATGGTAAGAT AGTAGTGATT TCTCCTATTC AAGGAGGACC AGCTGAAAAA GCAGGAATAA AAACTGGAGA TATTATCTTA AAAATAAATG GAGAACAAGT TTCAGGAAGT GAATTAGATA AAGCCGTTTC AATGATGAAA GGTGCTACAA AAGAAAATAT AAAATTAACA TTATATAGAG AAGGTAAAGG CGAATTTGAT GTTGATGTTA TGAGAGATGT AATTAAAACA GTTAACGTTA AAAGTGAAAT GATTAAGGGA GATATTGGAT ATATAGAAGT TTTAGCTTTT GATGAGGGAA CAGCTAAAGA CTTTGAAACT CAATTAAAAG CTTTAGAAGA GAAAGGTATG AAGGGATTAA TCCTTGATTT AAGAGGAAAT CCAGGAGGAT TTATGAAAGA ATGTGTAGAT CTAGTATCAA ACTTTGTTCC AAAAGATAAA GTTATAGTGT CTACAATAGA TAAGTATGGT AATAAAGAGG AAAGTGTATC TAAAGGCGGA ATTGCACAGG GAATGCCTTT AGTAGTTTTA ATTGATGGAG GTACTGCTTC TGCCTCAGAA ATAGTAGCAG GAGCTATTAG AGATTATGAT TTAGGAACTC TAGTTGGAAC AACATCCTTT GGTAAAGGAA TAGTTCAAGT TGTCTTAGAT AAGATAGGTC AAGAAAAAGA TGGTACAGCT TTAAAAGTAA CTATTTCAAA ATACTATACT CCAAATGGAG AAAATATTCA CAAAAAGGGT ATAGGACCAG ATGTTACAGT TGAATATCCA AAAGAGCTTA AAGAAAAGAC ATATTCAAGA AGTACTGATC CTCAATTTGA AAAAGCCTTA GAAATCATAC AAGAAAAGAT AAAATAA
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Protein sequence | MSHNKDEKNK YNNIIKNLKK KKGFRALAMG VGLTLIIGVS VYAGNRLTAF GILPITSVSA VQSSLEKVND TKNFKKVLEV REMLYRWYDG EIDDSKLAEG AIKGMVSSLG DQYTYYMNGK EFSDFKEKSQ GNYMGIGIQV AVKDGKIVVI SPIQGGPAEK AGIKTGDIIL KINGEQVSGS ELDKAVSMMK GATKENIKLT LYREGKGEFD VDVMRDVIKT VNVKSEMIKG DIGYIEVLAF DEGTAKDFET QLKALEEKGM KGLILDLRGN PGGFMKECVD LVSNFVPKDK VIVSTIDKYG NKEESVSKGG IAQGMPLVVL IDGGTASASE IVAGAIRDYD LGTLVGTTSF GKGIVQVVLD KIGQEKDGTA LKVTISKYYT PNGENIHKKG IGPDVTVEYP KELKEKTYSR STDPQFEKAL EIIQEKIK
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