| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0288 |
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| Symbol | |
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| ID | 4204894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 345433 |
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| End bp | 346377 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642564845 |
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| Product | transketolase |
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| Protein accession | YP_697617 |
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| Protein GI | 110801943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000211069 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAA AAATAGCAAC TAGAGAAGCA TACGGAAAAG CATTAGCTGC TTTAGCTAAC
GAAAATAAGA ACATAGTAGT TTTAGACGCA GACCTTTCAA AATCAACTAA AACTGCTGAT
TTCAAAAAAG CATGCCCAGA AAGATTCATA AATATGGGTA TTGCAGAAGG AAATATGATG
TCAGTAGCAG CAGGTTTATC AACTTGTGGA AAAATTCCAT TTGCTAGTAC ATTTGCTATG
TTTGCTGCTG GAAGAGCATT TGAGCAAATA AGAAACTCAA TATGTTACCC AAGATTAAAT
GTAAAAATAT GTGCTACTCA TGCTGGTTTA ACAGTTGGTG AAGATGGAGC ATCACACCAA
GCTATAGAAG ATTTATCTTT AATGAGAAGT ATACCAAACA TGACAGTAAT ATGCCCATCA
GATGCAGTTG AAACAGAAGC TGCAATAAGA GCTATTGCTG AATACAATGG ACCTTGCTAT
GTAAGATTAG GAAGAGCAGG AGTTAATGTA ATAAATGATA GACCAGAGTA CAAGTTTGAA
ATTGGAAAAG GTATAGAATT AAAAGAAGGT AATGATGTAA CATTATTTGC AACAGGTATA
ATGGTTGATG TAGCTATAGA AGCTGTTGAA GCTTTAGCTA AAGAAGGAAT TAACGCTAGA
TTAATAAACA TTCATACTAT TAAACCAATA GATTCAGAGC TTATATTAAA AGCTGCTAAA
GAAACTGGAG CAATAGTTAC ATTAGAAGAG CATAATATAA TCGGAGGATT AGGATCAGCT
GTAGCTGAGG TTGTTGGAGG AGAATATCCA GTACCAGTAG TTAGAGTTGG TGTTAAAGAT
ACATTCGGAG AAAGTGGTAA ACCAGACCAA TTATTAAAGG CTTATGGATT AACTTCAGAA
GAAGCAGTTA AGGCTGCTAA GAAAGCAATG AGCTTAAAAA GATAA
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| Protein sequence | MAKKIATREA YGKALAALAN ENKNIVVLDA DLSKSTKTAD FKKACPERFI NMGIAEGNMM
SVAAGLSTCG KIPFASTFAM FAAGRAFEQI RNSICYPRLN VKICATHAGL TVGEDGASHQ
AIEDLSLMRS IPNMTVICPS DAVETEAAIR AIAEYNGPCY VRLGRAGVNV INDRPEYKFE
IGKGIELKEG NDVTLFATGI MVDVAIEAVE ALAKEGINAR LINIHTIKPI DSELILKAAK
ETGAIVTLEE HNIIGGLGSA VAEVVGGEYP VPVVRVGVKD TFGESGKPDQ LLKAYGLTSE
EAVKAAKKAM SLKR
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