Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0286 |
Symbol | |
ID | 4205537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 343819 |
End bp | 344172 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642564843 |
Product | PemK family protein |
Protein accession | YP_697615 |
Protein GI | 110803064 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2337] Growth inhibitor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.2389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAGTT TAAATGTAAA AAGAGGGGAT ATATTTTATG CTGATCTTAG TCCAGTTGTT GGATCAGAGC AAGGTGGAAT AAGACCAGTC ATAATAATAC AAAATGATAT AGGAAACAGG TATAGTCCAA CTGTAATCGT TGCGGCTATA ACTTCACAAA TAAATAAGGC AAAATTGCCT ACACATGTAG AAATTTCTTC AGAGGAATAT GGATTAAATA GAGATTCTGT TGTTCTTTTA GAACAAATAA GAACTTTAGA TAAGAAGAGA TTAAAAGAGA AAATTGGACA TATGACAGAG GAAGACATGA AAAAAGTAAA TAAATCGCTG TTGATAAGTT TAAATTTACA ATAA
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Protein sequence | MASLNVKRGD IFYADLSPVV GSEQGGIRPV IIIQNDIGNR YSPTVIVAAI TSQINKAKLP THVEISSEEY GLNRDSVVLL EQIRTLDKKR LKEKIGHMTE EDMKKVNKSL LISLNLQ
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