| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0275 |
|---|
| Symbol | |
|---|
| ID | 4206552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 333227 |
|---|
| End bp | 334426 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642564833 |
|---|
| Product | metallo-beta-lactamase family flavodoxin |
|---|
| Protein accession | YP_697605 |
|---|
| Protein GI | 110801803 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0426] Uncharacterized flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCACT TAAATATTAA AGACGATTTA TTTTGGGTAG GAGCATTAGA TCCAAACCTT
AGAGTATTTG ACATAATAAT GTATACACCT TACGGAACAA CTTATAATTC ATATGTTGTA
AAAGGTAGTG AAAAAACAGC AATATTTGAA ACTGTAAAGG CTGAATTCTT CGATCAGTAT
ATAGCAAGAT TAAAAGACTT AGGTGTAGAA CCTTCAGAAA TTGACTATAT CGTTGTAAGT
CATACTGAGC CTGACCATGC TGGTTCTATA GGTAAAATAT TAGAATTAGC TCCTAAGGCT
AAAATAGTAG CATCACCTAT AGCTATTAAC TATATAAAAG AAATAGTTAA TGGAGATTTT
GAATCAATTC CAGTTAAAGA TGGAGATTCA ATTTCTTTAG GAAATAAAAC TTTAAAATTC
ATGTCAGTAC CATTCTTACA CTGGCCTGAT ACAATCTACA CTTACGTAGA AGAAGATAAA
ACTCTTATCA CTTGTGATTC ATTCGGAAGC CACTATTCTT GTGAAGAAAT GTTTGATGAT
TTAATTCCTA ATGAAGAAGA ATATATGGAA GCATTAAAAT ACTACTTTGA TTGTATAATG
GGACCATTTA AACCATATGT TTTAAAAGCT CTTGATAAAA TAAAAGGATT AGACATAGAA
ATAATCTGTC CAGGTCATGG TCCAATCTTA AGATCTAACC CATATAAAGT GGTTAATCTT
TATAAAGAAT GGAGTACTCC AGCTCCAGCT AAGGAAGTTA AAAAAGCTTC AATATTCTAT
GTTTCTGCAT ATGGATATAC TAAACAATTA GCTGAAAAAA TAGCTGAAGG TATTAAATCA
ACTGGAAACT TAGACATAAA TCTATTTAAT ATAATAGAAC ATGATATGAC AGAATTAGTT
GGTGAAGTTG GTTCATCAGA TGCTATATTA TTTGGTTCTC CAACAATCGT AAATGAACTT
GTTGAGCCAG TAAGAGATTT AATGGCAAAA CTTAACCCTG TAATTCATGG TGGAAAAATA
GCTGGTGCCT TTGGTTCATA TGGATGGAGT GGTGAAGCTG TTCCTAGAAT AGAAAGTAGA
TTAAAAGAAT TAAGAATGAA TATGCCTGTT GAAGGTTTAA GAATTAAATT TAAGCCATCA
GAAGAAGAAG CTCAAAAAGC TTTCGACTTT GGTGTTGAAA TAGGAAATGC TTTAAAATAA
|
|---|
| Protein sequence | MKHLNIKDDL FWVGALDPNL RVFDIIMYTP YGTTYNSYVV KGSEKTAIFE TVKAEFFDQY
IARLKDLGVE PSEIDYIVVS HTEPDHAGSI GKILELAPKA KIVASPIAIN YIKEIVNGDF
ESIPVKDGDS ISLGNKTLKF MSVPFLHWPD TIYTYVEEDK TLITCDSFGS HYSCEEMFDD
LIPNEEEYME ALKYYFDCIM GPFKPYVLKA LDKIKGLDIE IICPGHGPIL RSNPYKVVNL
YKEWSTPAPA KEVKKASIFY VSAYGYTKQL AEKIAEGIKS TGNLDINLFN IIEHDMTELV
GEVGSSDAIL FGSPTIVNEL VEPVRDLMAK LNPVIHGGKI AGAFGSYGWS GEAVPRIESR
LKELRMNMPV EGLRIKFKPS EEEAQKAFDF GVEIGNALK
|
|---|
| |