Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0255 |
Symbol | |
ID | 4205187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 313920 |
End bp | 315092 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564813 |
Product | teichoic acid translocation ATP-binding protein |
Protein accession | YP_697586 |
Protein GI | 110802059 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTTG CTATAAGAGT TAAAGACTTA ACTAAAAAAT ATAAGTTATA TCAAAAGAGA TCTGAAAGAT TAGCGAATGC TTTTGGTAAA GAAAAGAATA TAAAAGAATT TTATGCTTTA AAGGGCGTTT CTTTTGAGAT AAGCAAGGGA GAATGTGTTG GTATTATCGG TCATAATGGG GCCGGTAAAT CAACACTTTT AAAATTACTG ACAGGAGTAG CTTTCCCTAC TTCTGGAGAG ATTGAGATAA ATGGAAGATT AGCATCTATG CTAGAATTAG GATCAGGATT TAATCCTGAG CTTACTGGTA TGGAAAACAT TTATTTTAAT GGTAGTTTAA ATGGTTTAAC TAAGGAAGAG ATAGATGGAA AATTAAAGGA TATACTTGAG TTTGCTGATA TAGGTAATTT TATAGAGCAA CCAGTAAAAA ATTATTCAAG TGGTATGTTT GCTAGATTAG CATTTGCCGT TGCTATTAAT GTAGACCCTG ATATATTAAT AGTTGATGAA ATTTTATCCG TTGGAGATGT TGGTTTCCAA GTTAAATGTA TGGAAAAATT CAATGAATTT AAGAAAAAGG GAAAAACAAT ACTTTACGTT TCTCATGGAC TTGGAACAGT GAAAAAGTTC TGTGACAGAG CAATTTGGCT TCAAAAAGGT GAAGTTATAG ATGATGGGAA TTCTGTAATT GTAGTAGAGA GATATTATAA TTTAAATTTT AATCCTGCTA ATATAGAACA ATTAAAAGAT CATAAAAGTG ACATAATAAA TAGTATAGTA GTTAAATCTA ATAAAAAAAA TGTAGAATAT CTTGAGAAAT TAGATTTAGA GGTTGAATAT GATCTTATTT CAAATGACTT AAAAGACCCT AACATAGTTT TAGAGTTTAG AAAAACTGAC TATGAACCAG GTACAACTAG AGGAAATGAT CAGTTTGTTT GTGGTATAAA TAGTAAAGAT AATATAAAAA ATATTCCTTT TAATTTAGGA GTTAATAAGT TAAAGGTGTC TTTAAATAAG ATTAACTTAG TTGCTGGAGT TTATTATATT GACTTTGTTT TAAGAGATGG TGAAGAGGAA GTATATAGAA AAATAAATGT ATATAGTTTT ACTTTGAATG ACAAGTATAG AGGAGAAGGT TTCTTAATAC TGGGGCATTC TTGGGGTAAT TAA
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Protein sequence | MSVAIRVKDL TKKYKLYQKR SERLANAFGK EKNIKEFYAL KGVSFEISKG ECVGIIGHNG AGKSTLLKLL TGVAFPTSGE IEINGRLASM LELGSGFNPE LTGMENIYFN GSLNGLTKEE IDGKLKDILE FADIGNFIEQ PVKNYSSGMF ARLAFAVAIN VDPDILIVDE ILSVGDVGFQ VKCMEKFNEF KKKGKTILYV SHGLGTVKKF CDRAIWLQKG EVIDDGNSVI VVERYYNLNF NPANIEQLKD HKSDIINSIV VKSNKKNVEY LEKLDLEVEY DLISNDLKDP NIVLEFRKTD YEPGTTRGND QFVCGINSKD NIKNIPFNLG VNKLKVSLNK INLVAGVYYI DFVLRDGEEE VYRKINVYSF TLNDKYRGEG FLILGHSWGN
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