Gene CPR_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0249 
Symbolung 
ID4206005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp302918 
End bp303595 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content30% 
IMG OID642564805 
Producturacil-DNA glycosylase 
Protein accessionYP_697582 
Protein GI110803910 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTG AATTTAATAA TGATTGGGAT GATTTATTAA AAGATGAGTT TGAAAAGGAA 
TATTACTTAA ATCTTAGAAA GTTTCTTATA GATGAATATA AAACTCAAAA AATACATCCA 
AGCATGTATG ATATATTTAA CGCATTAAAA TTCACACCTT ACAAAGATGT TAAGGTTGTT 
ATTTTAGGTC AAGATCCATA TCATGGACCA AACCAAGCTC ATGGATTTAG CTTTTCTGTT 
AAACCAGGAG TTCAAACTCC TCCATCTTTG CGAAACATGT TTAAAGAATT AAATTCTGAC 
CTTGGATGTT ACATACCTAA CAATGGATTT TTGGAATCTT GGGCTAAACA AGGTATTCTT 
TTATTAAATA CTGTTTTAAC AGTTAGAGAA GGGCAAGCAA ATTCTCATAA GGGTAAGGGT 
TGGGAAATAT TCACTGATAG AGTAATTGAA TTGTTAAACA AAAGAGAAGA ACCTATAGTA 
TTTATTCTTT GGGGAAGAAA TGCTATTTCA AAAGAAACTT TGATAACTAA TCCAATACAT 
AAAATAATAA AATCAGTGCA TCCAAGTCCA CTATCTGCTA CTCGCGGATT CTTTGGTTCA 
AAACCATTCT CTAAAACTAA TGATTTTTTA GTTTCAATAA ATAAAGAACC TATAGATTGG 
CAAATACCTA ATATATAA
 
Protein sequence
MAAEFNNDWD DLLKDEFEKE YYLNLRKFLI DEYKTQKIHP SMYDIFNALK FTPYKDVKVV 
ILGQDPYHGP NQAHGFSFSV KPGVQTPPSL RNMFKELNSD LGCYIPNNGF LESWAKQGIL 
LLNTVLTVRE GQANSHKGKG WEIFTDRVIE LLNKREEPIV FILWGRNAIS KETLITNPIH 
KIIKSVHPSP LSATRGFFGS KPFSKTNDFL VSINKEPIDW QIPNI