Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0245 |
Symbol | |
ID | 4205439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 297960 |
End bp | 299114 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642564801 |
Product | ISCpe2, transposase orfB |
Protein accession | YP_697578 |
Protein GI | 110802174 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAAGAA AGAAAGCATA TAAATTTAGA ATATACCCAA CTAAGAAACA AGCCGAGCTA ATTAACAAGA CTATTGGATG TTGTAGGTTT GTATTCAACT ATTCTTTAGG TGTTCAAAAA ACTAAAGATA ATTATTGGAA TATAGTTGAG GAGATGGTTC AACAAGGATA CTTCCAAGAG AATAATTGGA AAGGCGAGTT CTTTAATAAA GCCAATTCAA TTAAAGATAT AGCCAAATTA AAGAAAAGCT ATGATTGGCT TAAAGAAGTA GATAGCATAG CACTACAGGC TTCTGTTGAA AATCTTGGTG CTGGATATGA TAAGTATTAC AAAAAAACAG GTGGCAGACC TAAATTTAAG TCTAAGAAAA ATGAAATACA ATCTTATACT ACTAAATTGG TAAAAGCTAA GGGTAATGTA AATATTGAGA TAGTAGGTAA AGGAATTAAA CTACCTAAAC TTGGATTAGT TAAGATAGAA AATTCAAGAA ATGTAGATGG AAATATTAAA AGAGTTACTG TGAGCAGAAC ACAATCTGGT AAATATTTTG CATCTATTCT TTGTGATGTA AATACTCAAG AATTACCTAA AATAGATAAA AAAGTTGGTG TAGATGTTGG ATTAAAAACT TTTGCTGTTT GTTCTGATGG ATATGAAGAA GCTAATCCTA AACACTTTAG AAAGGCAGAA AAAAGACTTA TTAAACTTCA AAGAGATTTA GCTCGTAAAG AATATAATTC TAAAAACTAT CACAAAAATA GAATTATGAT TGCTAAATTA CATGAAAGGA TAGCAAATCA AAGAATGGAC TTCTTACAAA AATTTTCAAC TAAGCTAATT AGAGAAAACC AATCAATAGC CATTGAAGAT TTAAGAGTTT CAAATATGCT TAAAAACCAC AAACTTGCTA AAGTAATTTC AGAAGCAAGT TGGTCAGAAT TTAGAAGAAT GCTAGAATAC AAGGCTAAAT GGTATGGTAG AGAAATAGTA ATTGCTCCAC CAGACTATGC AAGCTCTCAA CTATGTTCTG AATGTGGCTA TAAGAATATA GAAGTTAAAA ATCTAGGTCT AAGAGAATGG GTATGTCCCG AATGTGGAAC ACACCATCAA AGAGACCTTA ATGCTTCAAT AAACTTGGAA AAGCTGATAG CTTAA
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Protein sequence | MIRKKAYKFR IYPTKKQAEL INKTIGCCRF VFNYSLGVQK TKDNYWNIVE EMVQQGYFQE NNWKGEFFNK ANSIKDIAKL KKSYDWLKEV DSIALQASVE NLGAGYDKYY KKTGGRPKFK SKKNEIQSYT TKLVKAKGNV NIEIVGKGIK LPKLGLVKIE NSRNVDGNIK RVTVSRTQSG KYFASILCDV NTQELPKIDK KVGVDVGLKT FAVCSDGYEE ANPKHFRKAE KRLIKLQRDL ARKEYNSKNY HKNRIMIAKL HERIANQRMD FLQKFSTKLI RENQSIAIED LRVSNMLKNH KLAKVISEAS WSEFRRMLEY KAKWYGREIV IAPPDYASSQ LCSECGYKNI EVKNLGLREW VCPECGTHHQ RDLNASINLE KLIA
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