Gene CPR_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0240 
Symbol 
ID4204004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp294796 
End bp295569 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content29% 
IMG OID642564797 
Productcapsular polysaccharide biosynthesis protein 
Protein accessionYP_697574 
Protein GI110801732 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4464] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGACA TACATTCGCA TATAATACCT AATATAGATG ACGGTTCAAA AAGTTTAGAA 
ATGTCCTTAG AAATGTTAAA AAGAGCAGAA GAGTCAGGAA CTAAGAAAAT AATAGCAACT
CCTCACTTCT TTAAGGGATA TTGGACAGAA AACTATAACA GTGTAAAAGA TAAAGTTAAA
GAGTTAAATA ATTTAGCTAA GGAAAATAAT TTAAATATTG AAATTTATCC AGGACAAGAA
GTATTCTTTA ATAATTACAT ATTAGAGGAT TTTAAGCTTG GTGATATTGG AACCTTAGGG
GGATCAAGAT ATATGCTTAT AGAATTCCCT ATGGATAAAA TATATTTTCA AAAAGCAATA
GATGAAATAT ATGAACTTAA AATAAAAGGA ATAACTCCAG TGATTGCTCA TCCAGAAAGA
TATGTTGATT TCATAAATAA TCCAGATACA ATAAATCAGT TTATTGATGA GGGATACTTA
TTCCAATTAA ACGGAGGAAG TCTTACTGGT TTATTTGGAA AGGAAGTAAA GAAAACAGCA
GAGCTATTCT TAGAAAATAA TCTATATAGC TTTATTGGAT CTGATGCTCA TAGTAATGGA
AATAGAAACA CTAGCTTAAA GGAAGCTTGT GAAGTTGCAA ATAGTATAAG CAGAGGAGCT
AGTAGAAGGT TTGAAGCTAA TGGACTTGCT TTATTAAATA ATGAAAAGAT AGTATTCCAA
GGACAAAAAA TTAAAAAGAA GAAAAAAGGA TTATTTTCAT TCTTAAAAAG ATAG
 
Protein sequence
MIDIHSHIIP NIDDGSKSLE MSLEMLKRAE ESGTKKIIAT PHFFKGYWTE NYNSVKDKVK 
ELNNLAKENN LNIEIYPGQE VFFNNYILED FKLGDIGTLG GSRYMLIEFP MDKIYFQKAI
DEIYELKIKG ITPVIAHPER YVDFINNPDT INQFIDEGYL FQLNGGSLTG LFGKEVKKTA
ELFLENNLYS FIGSDAHSNG NRNTSLKEAC EVANSISRGA SRRFEANGLA LLNNEKIVFQ
GQKIKKKKKG LFSFLKR