Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0240 |
Symbol | |
ID | 4204004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 294796 |
End bp | 295569 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564797 |
Product | capsular polysaccharide biosynthesis protein |
Protein accession | YP_697574 |
Protein GI | 110801732 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4464] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGACA TACATTCGCA TATAATACCT AATATAGATG ACGGTTCAAA AAGTTTAGAA ATGTCCTTAG AAATGTTAAA AAGAGCAGAA GAGTCAGGAA CTAAGAAAAT AATAGCAACT CCTCACTTCT TTAAGGGATA TTGGACAGAA AACTATAACA GTGTAAAAGA TAAAGTTAAA GAGTTAAATA ATTTAGCTAA GGAAAATAAT TTAAATATTG AAATTTATCC AGGACAAGAA GTATTCTTTA ATAATTACAT ATTAGAGGAT TTTAAGCTTG GTGATATTGG AACCTTAGGG GGATCAAGAT ATATGCTTAT AGAATTCCCT ATGGATAAAA TATATTTTCA AAAAGCAATA GATGAAATAT ATGAACTTAA AATAAAAGGA ATAACTCCAG TGATTGCTCA TCCAGAAAGA TATGTTGATT TCATAAATAA TCCAGATACA ATAAATCAGT TTATTGATGA GGGATACTTA TTCCAATTAA ACGGAGGAAG TCTTACTGGT TTATTTGGAA AGGAAGTAAA GAAAACAGCA GAGCTATTCT TAGAAAATAA TCTATATAGC TTTATTGGAT CTGATGCTCA TAGTAATGGA AATAGAAACA CTAGCTTAAA GGAAGCTTGT GAAGTTGCAA ATAGTATAAG CAGAGGAGCT AGTAGAAGGT TTGAAGCTAA TGGACTTGCT TTATTAAATA ATGAAAAGAT AGTATTCCAA GGACAAAAAA TTAAAAAGAA GAAAAAAGGA TTATTTTCAT TCTTAAAAAG ATAG
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Protein sequence | MIDIHSHIIP NIDDGSKSLE MSLEMLKRAE ESGTKKIIAT PHFFKGYWTE NYNSVKDKVK ELNNLAKENN LNIEIYPGQE VFFNNYILED FKLGDIGTLG GSRYMLIEFP MDKIYFQKAI DEIYELKIKG ITPVIAHPER YVDFINNPDT INQFIDEGYL FQLNGGSLTG LFGKEVKKTA ELFLENNLYS FIGSDAHSNG NRNTSLKEAC EVANSISRGA SRRFEANGLA LLNNEKIVFQ GQKIKKKKKG LFSFLKR
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