Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0212 |
Symbol | |
ID | 4206426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 266403 |
End bp | 267290 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642564769 |
Product | putative ferrichrome ABC transporter periplasmic-binding protein |
Protein accession | YP_697547 |
Protein GI | 110802647 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | [TIGR03659] heme ABC transporter, heme-binding protein isdE |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTTTAA AAAAGGGTAT AGCTTTAAGT TTAATATGCC TTTTAGGCTT TGGAGTTATG GGATGTTCAA ATAACTCTGG AGAATCAAAG GAAAGTTTAA AAAAAGAAAG TGGAGAAGAG ATTGTTGTGG CAACCTCTGT TGCTGTAACA GAAATATTAG ATGAATTAGG GGTAAAGGTA AGTGGAGTTC CAACTAGTTC TTATGATTTG CCTGAAAGTA CTAAAGATGC GGTTAAAGTT GGTAATCCTA TGAATCCAGA TTTAGAAATA ATAAAATCTT TAAATCCAGA TGTTGTAGTA TCTGTAGATA CCTTAGGAGA AGATTATAAA AAACTATTTA CTGATAACAA TATACCTAGT GAATTTATAG ATTTAACTAC ATTAGAAGGA TTAAAAACAA GTATATCAAC TTTAGGTGAA AGATTTAATA AGACGGAAAA AGCAAATGAA ATATTAAATG AGCTTAAAGT TAAGGAAGAT GAGTTTGTGA ACTTATCTAA AGAAGAAAAA AAGAATGTTT TATTAGTATT TGCAGCACCA GGAAGCATGA TGATTGCTAC GCCTTCATCT TACATAGGAA ATTTAGTTGA TAAGATTGGA GCAAATAACA TAGTTAAAGA TGATAAAAAG CCATTTGTTT CATATAGCAA TGAAGAAATA GTAAAGCTAA ATCCAGATAT GGTATTAGTT ATGACTCATG GAATGCCAGA ACAAGCTAAA AAAATGGCTG AAGAAAAATT TGCTTCAGAT CCAGCTTGGA GTAGAATTGA GGCTGTTAAA GAAGGAAAGG TCTATTACTT AGAAAATGGG TACTTTGGTA TGAGTGCAAA CCTAAAAGTA ACAGAATCTT TAGATAAGTT AGGTGAAATA ATATATGGTG AAAAATAA
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Protein sequence | MFLKKGIALS LICLLGFGVM GCSNNSGESK ESLKKESGEE IVVATSVAVT EILDELGVKV SGVPTSSYDL PESTKDAVKV GNPMNPDLEI IKSLNPDVVV SVDTLGEDYK KLFTDNNIPS EFIDLTTLEG LKTSISTLGE RFNKTEKANE ILNELKVKED EFVNLSKEEK KNVLLVFAAP GSMMIATPSS YIGNLVDKIG ANNIVKDDKK PFVSYSNEEI VKLNPDMVLV MTHGMPEQAK KMAEEKFASD PAWSRIEAVK EGKVYYLENG YFGMSANLKV TESLDKLGEI IYGEK
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