| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0208 |
|---|
| Symbol | |
|---|
| ID | 4204963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 261979 |
|---|
| End bp | 262737 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 23% |
|---|
| IMG OID | 642564765 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_697543 |
|---|
| Protein GI | 110802864 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTTTTT TAAAATCAAT TCTTGTAGAT TTTTTTAACT GCTGTGAAAT TCCAATAAGA
GCTGTAGATA ATAATATGAA TATTCTTTCT GAGGTTGGTT ACTCTTCTTT TTATGATTAT
ATATTTAATA ACTTAAACTT AAATAGCAAG TTTGAGCGCT CATATTTAAA ACATGATCAT
AATGACTCAC TAATAATTAC CTTTGAAAAT AATATATCTT TTTATTCATT GTTTAATTAT
AAATCAATTG ATAAAGACTT AATTTTCATA ATAGGTCCCC TATATTTAAA AGAAGATTTA
AAAAATTCTA ATGATGATTT AGAACTTTAT AAAATACCTT TAAAGACTAA AAGCTGTCTT
AAGTATTATA ATTCTCTATT GAAAATAATC TTAGATGAAA AACTTAAAGA TAATTTTTCA
ATTTCATATT CTCCTTATAT AGGAAGAGCT ATAGATTTTA TAGAAAAGAA TTACGCAGAA
GAAATTACTA TAGACTCTCT TTGCACAGAA TTTAAAATAA ATAAGTCCTA CTTCTGTAAT
ATATTTAAAA ATGAAACAGG CCAAACATTT ATAAACTTTT TAAATAATTA CAGAATAAAA
AAGAGTAAGG ACTTACTTAA GGATCTTGAT TTATCACTTT TAGATATTGC ACATAAGGTT
GGATTTAGTA ATCAAAGTTA CTACTGCACA GTATTTAAAA AATTTACTGG TCTAACTCCT
TTAAAATACA GAGAGGATAA CTATAAAAAA GGTTTGTAA
|
|---|
| Protein sequence | MIFLKSILVD FFNCCEIPIR AVDNNMNILS EVGYSSFYDY IFNNLNLNSK FERSYLKHDH
NDSLIITFEN NISFYSLFNY KSIDKDLIFI IGPLYLKEDL KNSNDDLELY KIPLKTKSCL
KYYNSLLKII LDEKLKDNFS ISYSPYIGRA IDFIEKNYAE EITIDSLCTE FKINKSYFCN
IFKNETGQTF INFLNNYRIK KSKDLLKDLD LSLLDIAHKV GFSNQSYYCT VFKKFTGLTP
LKYREDNYKK GL
|
|---|
| |