| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0175 |
|---|
| Symbol | nanA |
|---|
| ID | 4204370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 215167 |
|---|
| End bp | 216033 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642564730 |
|---|
| Product | N-acetylneuraminate lyase |
|---|
| Protein accession | YP_697512 |
|---|
| Protein GI | 110801754 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00683] N-acetylneuraminate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTA TTTATTCAGC ATTATTAGTT TCATTTGACA AGGATGGAAA CATCAATGAG
AAAGGTTTAA GAGAAATAAT TAGACACAAT ATTGATGTAT GTAAAATAGA CGGGCTTTAT
GTAGGAGGAA GTACTGGAGA AAACTTCATG CTTTCAACTG ATGAAAAGAA AAGAATATTT
GAAATTGCTA TGGACGAAGC AAAAGGACAA GTTAAATTAA TAGCTCAAGT AGGATCAGTT
AATTTAAAAG AAGCTGTAGA GTTAGCTAAA TTTACTACAG ATTTAGGATA TGATGCAATA
TCAGCAGTTA CACCATTCTA CTATAAATTC GATTTTAATG AAATAAAACA TTACTATGAA
ACAATAATAA ATTCTGTTGA CAATAAACTT ATAATTTACT CAATTCCTTT CTTAACAGGA
GTAAATATGT CAATAGAACA ATTTGCTGAG CTTTTTGAAA ACGATAAGAT TATTGGTGTT
AAATTCACAG CAGCAGACTT CTACTTATTA GAACGTATGA GAAAAGCATT CCCAGATAAA
TTAATATTTG CTGGATTTGA TGAAATGATG TTACCAGCTA CAGTACTTGG TGTTGATGGA
GCTATAGGAT CAACATTTAA CGTAAATGGT ATTAGAGCAA GACAAATCTT TGAAGCTGCT
CAAAAAGGTG ACATTGAAAC TGCTTTAGAA GTTCAACATG TAACTAATGA TTTAATAACT
GATATCTTAA ATAATGGTCT TTACCAAACA ATAAAATTAA TTCTTCAAGA GCAAGGTGTT
GATGCTGGAT ATTGTAGACA ACCTATGAAA GAAGCTACTG AAGAAATGAT TGAAAAAGCT
AAGGAAATTA ATAAAAAATA TTTCTAA
|
|---|
| Protein sequence | MKGIYSALLV SFDKDGNINE KGLREIIRHN IDVCKIDGLY VGGSTGENFM LSTDEKKRIF
EIAMDEAKGQ VKLIAQVGSV NLKEAVELAK FTTDLGYDAI SAVTPFYYKF DFNEIKHYYE
TIINSVDNKL IIYSIPFLTG VNMSIEQFAE LFENDKIIGV KFTAADFYLL ERMRKAFPDK
LIFAGFDEMM LPATVLGVDG AIGSTFNVNG IRARQIFEAA QKGDIETALE VQHVTNDLIT
DILNNGLYQT IKLILQEQGV DAGYCRQPMK EATEEMIEKA KEINKKYF
|
|---|
| |